Desulfomicrobium orale: AXF15_08310
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Entry
AXF15_08310 CDS
T04289
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
doa
Desulfomicrobium orale
Pathway
doa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
doa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AXF15_08310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
doa03019
]
AXF15_08310
03016 Transfer RNA biogenesis [BR:
doa03016
]
AXF15_08310
Enzymes [BR:
doa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AXF15_08310
Messenger RNA biogenesis [BR:
doa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AXF15_08310
Transfer RNA biogenesis [BR:
doa03016
]
Prokaryotic type
tRNA degradation factors
AXF15_08310
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
S1_RRP5
KH-I_KHDC4-BBP
KH_2
RNA_pol_Rpc4
OB_RRP5_4th
KH_NusA_2nd
Motif
Other DBs
NCBI-ProteinID:
AMD93096
UniProt:
A0A120KN52
LinkDB
All DBs
Position
complement(1808853..1811057)
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AA seq
734 aa
AA seq
DB search
MTFQTTRTAIPMPEGEIVIEHGKLALQASGAVTVKWGDTVVLVTATHQALDREADFLPLT
CNYQEMLYAAGRIPGNYFRREVGRPSDHETLVSRLIDRPIRPLFPKGCAHEIQIIATVLS
SDKERNADTLAMLGASAALHISDIPFAGPVAAIRVGYADGKFLLNPTASQLAGSELNMVL
AGTRDAVVMVEGGAQFLSEDIMAEAVAWGHSQLTPFLDAQEELRAALGREKFVVTPPQEP
EDLIAAVTELAEAPLAAALTVPTKMERREAKKRVRQDLMEALAVRFADNPERLKNVPEIL
EDLEKKIVRQRILTDKVRIDGRDLTTVRPLTMEVGVLPRTHGSAIFARGETKALATCTLG
STRDEQRIETLAGEVARRFMLHYNFPPYSVGEARMLRGPSRREVGHGNLSERALMPVLPP
QDSFPFAIRVVSDIMESNGSSSMASVCGGTLALMDAGVPIKTPVAGVAMGLIKEGDEYLV
LTDILGDEDHLGDMDFKVAGSHDGVTSIQMDIKIAGIPAEVMKKALYQAREARLHILAQM
ERVIAAPRGELSRFAPQMDVVHISPDKIRDVIGPGGKNIKAICEATQADIDIDDSGKVSL
FAPDQASLAKAREMVLHYDQKAELNKDYDGIVKKIMDFGAFIEILPGLEGLCHISQLARE
RVNTVQDVVQEGDAIRVRVIDIEPSGRIKLSRKAIILEELGEDPEPPAPPRGDRPRGDRP
RRDRGDRRGPRNDR
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgacattccagactaccagaaccgccatccccatgcccgagggcgaaatcgtcatcgag
cacggcaaactggctcttcaggccagtggcgccgtaaccgtgaagtggggtgacaccgtg
gtcctcgtcacggccacgcatcaggctctggaccgggaagcggactttctgcccctgacc
tgcaactatcaggaaatgctctatgcggccggccgcatccccggtaattacttccgccgc
gaagtgggccgcccgagcgatcacgaaaccctggtttcccggctcatcgaccgtcccatc
cgcccactcttccccaagggatgcgcacacgaaatccagatcatcgccaccgttctctcc
tccgacaaggaacgcaacgccgacactctggccatgctcggcgcgtcggcggccctgcat
atttccgacattcctttcgccggtcccgtggcggccatccgcgtgggctacgccgacggc
aagtttctgctgaaccccaccgcctcccagctggcgggcagcgaattgaacatggtcctg
gccgggacccgcgacgccgtggtcatggtcgaaggcggcgcccagttcctgtccgaggac
atcatggccgaagccgtggcctgggggcactcccagcttactcctttcctggacgcccag
gaggaactgcgcgccgctctgggcagggaaaagttcgtggtcactccgcctcaggagccc
gaggatctgatcgccgccgtgaccgaactggccgaggcgcctctcgctgccgctctgacc
gtgccgaccaaaatggagcgccgggaggccaagaaaagggttcgtcaggacctcatggaa
gctctggccgtccgctttgccgacaatccggagcgtctcaagaacgtgccggaaattctt
gaggatctggaaaagaaaatcgtgcgccagcgcatcctgaccgacaaagtgcgtatcgac
ggccgcgacctgactactgtccgccccctgaccatggaagtgggcgttctcccccgcacc
cacggctcggccattttcgcccggggcgagaccaaagccttggccacctgcactctaggc
agcacccgggacgagcagcgcatcgaaaccctggccggtgaagtggcccgccgtttcatg
ctgcattacaatttcccgccctacagcgtgggtgaggcccgcatgctgcgcggcccgtcc
cggcgcgaagtcggacacggcaacctgtccgaacgcgccctcatgcccgtgctgccgccg
caggactcctttcctttcgccatccgcgtggtttcggacatcatggaatccaacggctcc
tcgtccatggcctccgtgtgcggcggaaccctggccctcatggacgcgggcgtacccatc
aagacgcctgtggcgggcgtggccatgggactcatcaaggaaggggacgaatacctggtc
ctgacagacattctgggcgacgaagaccatctgggcgacatggatttcaaggtggcgggc
agccacgacggcgtgacgtccatccagatggacatcaagatcgcgggcatcccggccgaa
gtcatgaaaaaagccctgtaccaggccagggaggcacgcttgcacattctggcgcagatg
gaacgggtcattgccgcgcccagaggagaattgtcccgcttcgcgccgcagatggatgtg
gtgcatatttctccggacaaaatccgtgacgtcatcggccctggcggcaagaatatcaag
gccatctgcgaagccacccaggccgacatcgacatcgacgactcgggcaaggtctctctc
ttcgctccggaccaagcctctctggccaaggccagggaaatggtcctgcattacgatcag
aaggccgagctgaacaaagattacgacggtatcgtcaaaaagatcatggacttcggggcg
ttcatcgaaattctgcccggcctggagggcctgtgtcacatctcccagctggccagagag
cgggtgaacacggtgcaggatgtggttcaggaaggcgacgccatcagggtccgggtgatc
gacattgaaccatccgggcggatcaagctgagccgcaaggccatcattctggaagagctg
ggcgaagacccggagccgcccgcgccaccccgtggcgatagaccccgtggtgacaggccg
cgcagagaccggggagaccgccgcggtccgcgtaacgaccgctga
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