Desulfomicrobium orale: AXF15_09100
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Entry
AXF15_09100 CDS
T04289
Name
(GenBank) heavy metal transporter
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
doa
Desulfomicrobium orale
Pathway
doa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
doa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AXF15_09100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
doa03400
]
AXF15_09100
Enzymes [BR:
doa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AXF15_09100
DNA repair and recombination proteins [BR:
doa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AXF15_09100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
HHH_5
Viral_helicase1
AAA_11
NTPase_1
nSTAND3
AAA_16
UvrD-helicase
HHH_2
AAA_22
NPHP3_N
SLFN-g3_helicase
AAA_18
AAA
MeaB
AAA_28
PhoH
TsaE
PIF1
MobB
Motif
Other DBs
NCBI-ProteinID:
AMD93243
UniProt:
A0A109WBK8
LinkDB
All DBs
Position
1963714..1965897
Genome browser
AA seq
727 aa
AA seq
DB search
MDSFLSIQGEVVSVVYENPENGYVIARLLVPSEPGQTTVVGVLGSVAPGESLRLTGEWTE
HPKFGRQFKAETCEHVLPASLNGIRRFLESGAVKGIGGKIAERLVSRFGSQVLDILDTDP
DRLLEVDGIGPSKLKTILTSWREKREVRGLMLFLQTHGVATTFAHRIFRQYGVNAVQRLR
ANPYDLAYDIHGIGFRTADDMALKLGFAEDAPQRLEAGVEYCLRQTAESAGHMFLPRPML
AEEAARLLGCHDLELVEERIDALVERKRLVAEPADGGENVFLIYFWRTEREIASRLHALR
EHASRLAPDRIAAAVEREEERLALSLSAEQRQAVESACGEKVAIITGGPGTGKTTITRVV
VRALKALGLRIGLAAPTGRAAKRLSEATGFTAVTLHRLLRFQPGTGFEFGEEKKLSLDAL
VVDEVSMLDSGLCLALLRALPLTCRLVFVGDENQLPSVGAGNILGDMLESGSIPAVRLTH
IYRQARESMIVLNAHRINQGEFPQGSPHAPPRADFFWVEKEHLGELQSLILRMVCERIPE
AYGLDPMTDVQVLTPMHRGEVGTIALNRLLQEHLNPEGRELTRGQRAYRIGDRVLQLRNN
YDKDVFNGDLGRIVGFDTQDETLTAEFDGREIEYAFDELDEIGLAYAISVHKSQGSEYPA
VVMPVVTQHYMLLQRNLIYTGLTRARKLAVLLGSRRAMHMGLGNERGRRRYTTLAARLRE
SDFIENI
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggactccttcctctccattcagggggaagtggtcagtgtggtctacgagaaccccgaa
aacggctacgtcatcgcccggctgctggtaccctcggagcccggccagaccacggtcgtc
ggcgtattgggttccgtggctcccggagaatccctgcgtcttaccggcgaatggaccgaa
catccgaagttcggccggcagttcaaggccgaaacctgcgagcatgtgctgcccgcgtcc
ctgaacggcatccgccgttttctggagtccggcgcggtgaagggcataggcgggaaaatc
gccgagcgtctggtcagccgcttcggcagccaggtgctggatattctggatacggacccg
gaccgtctgctggaagtggacggcatcggcccgtccaagctgaagaccatcctgacctcc
tggcgggaaaagcgggaagtgcgcgggctcatgctctttctgcagacccacggggtggcc
accaccttcgctcatcggattttccgccaatacggcgtgaatgccgtgcagcgcctgcgc
gccaatccgtatgatctggcctacgacatccatggcataggttttcgcaccgccgacgac
atggccctcaagctcggtttcgccgaggacgcgccccagcggctggaagcgggggtggag
tattgtctgcgccagaccgccgaaagcgccgggcacatgtttctgccccgtcccatgctg
gccgaggaggcggcccggctgctcggatgccatgacctggaacttgtggaagagcggatt
gacgccctggtggagcgcaagcgtctggtggcggagcctgccgacggcggggaaaacgtg
tttctgatatatttctggcggaccgagcgggaaattgcctcccggctgcacgctctgcgc
gagcacgcaagccggctcgctccggacaggattgccgccgccgtggagcgggaggaagag
cggcttgccctcagcctgtcggccgaacagcggcaggccgtggagtcggcctgcggggaa
aaggtggccatcatcaccggcggacccggcacgggcaagaccaccatcacccgcgtggtg
gttcgcgccctgaaggctctgggcctgcgcatcggcctggccgcgcccacgggccgggcg
gccaagcgtctgtccgaggccacggggttcacggccgtcaccctgcaccggctgctgcgt
ttccagccgggcacgggcttcgagttcggcgaggaaaaaaaactctcgctggacgctctg
gtggtggacgaggtttccatgctggacagcggcctgtgtctggcgctgctgcgggctctg
cccctgacctgccgccttgtttttgtgggcgatgaaaatcagctgccgtccgtgggtgcg
ggaaacattctgggggacatgctggagagcggaagcattccggccgtgcgcctgactcat
atctaccgtcaggccagggaaagcatgatcgtgctcaacgcccaccgcatcaatcagggc
gaatttccgcagggcagcccccatgctccgcccagggccgattttttctgggtggaaaag
gaacacctgggcgagttgcagagcctcatcctgcgcatggtctgcgagcgcatccccgaa
gcctacggacttgatcccatgacggatgtgcaggtgctcacgcccatgcacaggggcgag
gtcggcaccattgccctgaaccggcttttgcaggagcacctcaaccccgagggccgggaa
ctgacgcgcggccagcgcgcctaccggatcggggaccgcgtgctgcaactgcgtaacaac
tacgacaaggatgtcttcaacggcgacctgggccgcatcgtggggttcgacacgcaggac
gaaaccttgaccgccgaattcgacggccgcgagatagagtacgccttcgacgaactggac
gagatcgggttggcctacgccatcagcgtgcataagagccagggcagcgaatacccggcc
gtggtcatgcccgtggtcacgcagcattacatgctgcttcagcggaatctcatctacacc
ggactgaccagagccagaaagctggccgtgctgctggggtcacgccgggccatgcatatg
ggattgggaaacgagcgcggccggcggcgttataccactttggccgcgcggctgagagag
tcggattttatagaaaatatatag
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