Desulfomicrobium orale: AXF15_12415
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Entry
AXF15_12415 CDS
T04289
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
doa
Desulfomicrobium orale
Brite
KEGG Orthology (KO) [BR:
doa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
doa03032
]
AXF15_12415
03400 DNA repair and recombination proteins [BR:
doa03400
]
AXF15_12415
Enzymes [BR:
doa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AXF15_12415
DNA replication proteins [BR:
doa03032
]
Prokaryotic type
DNA Topoisomerases
AXF15_12415
DNA repair and recombination proteins [BR:
doa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AXF15_12415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_recom
Toprim_4
Zn_ribbon_Top1
Zn_ribbon_8
zf-Mss51
TackOD1
Zn_ribbon_ACC
Motif
Other DBs
NCBI-ProteinID:
AMD93824
UniProt:
A0A0X8JRS5
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All DBs
Position
2643317..2645272
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AA seq
651 aa
AA seq
DB search
MKLFIVESPGKVKKIQSMLGNGWTVESSAGHVRDLPAKEMGVAAPDFTPQYEPTERGAEV
LRKLSELAAQADEIYLATDPDREGEAIAWHLADALKLSSPKRITYTEITESAVKEAVARP
RGIDRDLVTAQAGRRVLDRICGYLVSGPLSQATGNRLSAGRVQSPAVRLVVERERVIRAH
QPITHYAVQLRFGDWTADWKPWLDDDEKYFTDEAAAQRVAQVHDLEVAGCRESEYHSSPP
APFTTSELLQAASATLKLNPGKTMRLAQRLFEAGHITYMRTDSSNISGEALAAVRAWCAE
HGLAYVSPPRIWPAGDGAQEAHEAIRPTHIEVEEAGGSAEEMALYEMIRLRTIASQMEDA
VYAVRTLQLLDDLDGRPVEFTAKGRTLVSAGWRELARNDQDEEEPEPDNPVPKLTAGQAV
VATNGKVLEKKTRPPARYTEASLIRELEKLGIGRPSTYAAIVSMILDRGYVATEQRHLIA
TELGETVVDNLTGNFSFVDYEFTRVMEASLDAIAQGEGDYRSLVADAYAQLQDEVDAFRR
KTCVHCPECGSLGLRHLVREADGKNPRFWNFWACDDCKATFADESGKPGSRQEARKESPY
KCPKCGRPMYRRQGETKGRRYDFWGCSGYKEGCKVTLQSRPDGSPDSENRR
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttttcattgttgaatcccccggcaaagtgaagaaaatccagtccatgctcgga
aacggctggaccgtcgagtccagcgccggacacgtccgggacctgcccgccaaagagatg
ggcgtggctgctcctgatttcacgccgcaatacgaacccacggaacgcggcgcggaagta
ctgcggaagctgtctgaactggcggcccaggccgatgaaatctatctggccaccgatccg
gaccgcgagggcgaagctatcgcctggcatctggccgatgcgctgaagctctccagtccc
aagcggataacatacacagaaatcacagaaagcgcggtaaaagaggctgtcgcccgtccg
cgcggcatcgaccgcgacctggtgaccgcccaggccggccggcgcgtgcttgaccgcatc
tgcggttatctggtttccggcccgctctcccaggccaccggcaacagactgtccgccggc
cgcgtccagtctccggccgtgcgtctggtcgtggagcgggaacgggtcatccgggcgcac
cagcccatcacgcactatgcggtgcagctgcgcttcggggactggacggcggactggaag
ccctggctggacgatgatgaaaagtacttcacggacgaagccgcagcacagcgggtggcg
caggtgcacgatctggaagtcgccggatgcagggaatccgagtatcattcatcgccgccc
gcaccctttaccacttccgaactgttgcaggccgcatccgccaccctgaagctcaatccc
ggcaaaaccatgcggctggcccagcggcttttcgaggccgggcacatcacctacatgcgt
acggattcctccaacatttcaggagaagccctggccgccgtccgcgcctggtgcgcggag
cacggccttgcatatgtcagtccgccacgcatctggccggccggagacggcgcgcaggaa
gcgcatgaagcaatccggccgacacatatcgaggtcgaggaagccggcggcagcgccgag
gaaatggccctgtacgagatgatccggctgcggaccattgccagccagatggaggacgcc
gtgtacgccgtgcgtacgcttcagcttctggacgacctggacggccgaccggtcgagttc
acagccaaaggccggactcttgtctccgcaggttggcgggaactggcccgcaacgatcag
gacgaggaagagccggagccggacaaccctgttccgaagctgaccgcggggcaggcagtc
gtggccacgaacgggaaggtcctggagaagaagacccgcccgcctgccagatacacagaa
gccagtctgatcagggagctggaaaagctcggcatcggacggccgtcaacctatgctgcc
atcgtctcgatgatccttgaccggggatatgtcgcaacggaacagcggcacctcatcgcc
actgaactcggtgaaacggtcgttgacaacctgaccgggaatttcagctttgtggactac
gaatttacccgggtaatggaagcttctctggacgccatcgctcagggcgaaggcgattac
agaagccttgtggccgacgcctatgcccagcttcaggatgaggtggacgccttccgcaga
aaaacatgcgtgcattgccctgaatgcggcagcctcggcctgcgtcatctggtcagagaa
gcggacggaaagaaccccaggttctggaatttctgggcctgcgacgactgcaaggccacc
ttcgccgacgaaagcggaaagccgggctccagacaggaagcaaggaaggaatctccgtac
aaatgcccgaagtgcggcaggcccatgtatcgccgccagggtgaaacaaaaggcaggcga
tacgacttctggggctgctccgggtacaaggagggatgcaaggtgacactgcaatccaga
ccggacggctcaccggattctgaaaacagaagatga
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