Dolichospermum sp. DL01: HEQ26_01205
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Entry
HEQ26_01205 CDS
T10442
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
doc Dolichospermum sp. DL01
Pathway
doc03420
Nucleotide excision repair
doc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
doc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HEQ26_01205 (pcrA)
03430 Mismatch repair
HEQ26_01205 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
doc03400
]
HEQ26_01205 (pcrA)
Enzymes [BR:
doc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HEQ26_01205 (pcrA)
DNA repair and recombination proteins [BR:
doc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HEQ26_01205 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
HEQ26_01205 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
DEAD
AAA_30
Viral_helicase1
AAA_12
ResIII
AAA_22
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
QSV61577
LinkDB
All DBs
Position
250498..252825
Genome browser
AA seq
775 aa
AA seq
DB search
MTTNIDFLSHLNPSQRQAVEHHCGPLLVVAGAGSGKTRALTYRIANLILKHGVNPENILA
VTFTNKAAREMKDRIQRIFAEQLAISQHGKKFDLLTEYEQSLLKSEVYRTKIKDMWCGTF
HSLFSRILRFDIEKYQDEKGRKWDKNFSIFDESDVQSVIKEIVTKDLNLDSKKFEPKSVR
YAISNAKNQGFSPQQFESEQPNYRGRVIADVYNRYQDKLSQNNALDFDDLILIPTRLFQQ
NEKVLSYWYRKFCHILVDEYQDTNRTQYDLIQLLVTNGESRKTEWKWQNRSVFVVGDADQ
SIYSFRMADFTILLEFQENFGDGLADDDTRSMVKLEENYRSCENILQAANELIENNTQRI
DKILKATREPGEAIYCHKADEEMAEAAFVINQIRNLENQHPELNWGNFAILYRTNAQSRP
FEELLVKYQIPYTVVGGMKFYDRKEIKDAVAYLRAINNPADTVSLLRVINTPRRGIGKAT
VDALVNASQQLGTTLWEILSDETSVNTLAGRSAKAVNNFAAMIYNRQEQIKVVPGSEILQ
GILEDSGYIKELQDQATDEADNRISNVNELHNAMLQFQEENAGEDISLQAFLQSAALSSD
LDNLKEGQTAVSLMTLHASKGLEFPVVFLVGLEQGLFPGYRSLQDPSLLEEERRLCYVGI
TRAQERLFLSHARERRLYGSREPAMRSQFLDEIPAELLTTQNKVTRSSTKTTSATPSKQS
TSGIWQVGDRVLHKSFGLGEITHIFGEGNKVSVAIKFLSLGQKIVDPRVAQLQKV
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgaccacaaatattgatttcctgagtcaccttaaccctagtcaacgtcaagccgtagaa
caccactgcggaccattgttggtggttgctggcgctggttcagggaaaacccgtgcgctt
acttaccgcattgctaatttgattctcaaacatggtgttaatcctgaaaatatcctcgcg
gtgacatttaccaacaaagccgctagggaaatgaaggacagaattcaaaggatatttgct
gaacaattagccatatcgcaacatggtaaaaagtttgatttgctgacagaatacgaacaa
agcttgctcaaatcagaggtttaccgcactaaaattaaagatatgtggtgtggaactttt
cacagtttattttcacggattctgcgatttgatatcgaaaaatatcaagatgaaaaaggc
agaaaatgggataaaaacttttctatctttgatgaatccgatgtgcaaagtgtaattaaa
gaaatagttactaaagatttaaatttagatagtaagaaatttgaacccaagtctgtacgc
tacgctattagtaatgctaaaaatcaaggattttctccccaacaatttgaaagcgaacag
cccaattatcgcggtagagtcatagctgatgtctataatcgctatcaggataaactttcc
caaaataacgctttagattttgatgatttaattttaattcctacccgattatttcaacaa
aatgaaaaagttctaagttattggtatcggaaattttgtcatattctagttgatgaatat
caagataccaacaggactcaatatgatttaattcagcttttggtcacaaatggagaaagc
cgtaaaactgaatggaaatggcaaaatcggtctgtgtttgtggttggtgatgctgaccag
tcaatttacagttttagaatggcagattttacgattttgctagaatttcaggaaaatttt
ggcgatggtttggcagatgatgatactcgttctatggtgaaattagaagagaattatcgt
tcttgtgaaaacattctccaagctgctaatgaattaattgaaaataacactcaacgcatt
gataaaattctcaaagccacaagagaaccaggagaagcaatttattgtcataaagctgat
gaagaaatggcagaagcggcttttgtgattaaccaaattagaaatttagaaaatcaacac
ccggaattaaattggggtaactttgcaattttatatcgaactaatgcccaatctcgacct
tttgaagaattattagtaaaatatcaaattccttatacggttgtgggaggaatgaaattt
tatgatcgtaaagaaattaaagatgctgtggcatatttaagggcaattaataaccctgct
gatactgtaagtttattacgggtgattaacacaccgcgcaggggcattggtaaggctact
gtggatgctttggtgaatgcttcccagcaattaggaacaactttatgggaaatattaagt
gatgaaacatctgtaaatactttagcaggacgttcagcgaaagctgtaaataattttgca
gccatgatttacaatcgtcaagaacaaatcaaagtagttcccggttcggagatattacaa
ggtattttagaagattctggttatattaaagaattgcaagatcaagctacagatgaagct
gataatagaatcagtaacgtcaatgaattgcataatgctatgttgcaatttcaagaagaa
aatgctggagaagatatttctttacaggcatttttgcaaagtgcggctttgagttctgat
ttagataatttaaaagagggacaaacagcggtttctttaatgactttacacgcttctaaa
gggttggaatttccggttgtctttttggtgggtttagaacagggactttttccgggttat
cgttccttacaagatccttcattgttagaagaggaacggcgtttgtgttatgttggtatt
actcgcgctcaagaacgtttattcttatcccatgccagagaacggcgtttatatgggtct
agagaaccggcaatgcgatcgcaatttctcgatgaaataccagcagaattactgactacc
caaaataaagttacccggagttctactaaaactacctctgcgactcctagtaaacaaagc
acttctggaatttggcaagtaggtgacagagtattgcataagtcctttgggcttggggaa
attactcacattttcggagaaggaaataaggtttctgtagcgattaaattcctgagttta
ggacaaaaaatagtagaccccagagtagcgcaattacaaaaagtttaa
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