Dolichospermum sp. DL01: HEQ26_07755
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Entry
HEQ26_07755 CDS
T10442
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
doc Dolichospermum sp. DL01
Pathway
doc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
doc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HEQ26_07755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
doc03019
]
HEQ26_07755
03009 Ribosome biogenesis [BR:
doc03009
]
HEQ26_07755
Enzymes [BR:
doc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HEQ26_07755
Messenger RNA biogenesis [BR:
doc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HEQ26_07755
Ribosome biogenesis [BR:
doc03009
]
Prokaryotic type
rRNA helicases
HEQ26_07755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
HEM4
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
QSV62669
LinkDB
All DBs
Position
complement(1638511..1640076)
Genome browser
AA seq
521 aa
AA seq
DB search
MNLSFQELGISPERATLLEGMGFTEPTNIQTQAIPQLLNGRDVVGQSQTGTGKTAAFSLP
ILERLDENLKAVQAIVLTPTRELAIQVHAAVSQFIGNSYLKAAAIYGGQSIDRQIMQLRR
GAQIVVGTPGRVIDLLDRGNLKLDQVKWFVLDEADEMLSMGFIDDVERILSQAPNERQTA
LFSATMPPSIRMLVNKFLNSPVTVTVEQPKAAPNKINQVAYMIPRHWTKAKALQPILEME
DPETALIFVRTRRTAAELTSQLQSAGHSVDEYHGDLSQQARERLLIRFRNRQVRWVVATD
IAARGLDVDQLSHVINFDLPDSVETYVHRIGRTGRAGKEGTAISLVQSFERRKQQAFERH
NRQTWQILSIPTKAQIEAQHIQKLRGQVAEALAGERLASFLPIISEMIEEYDAHAIAAAA
LQIAYDQTRPAWLISGVDLPVDESPTPKPRINKRGDGGERERSSGGGRGGRSSWSKEGRG
NDERRSSGGSGGSAKPKLKIAYNEPSSTPSNHKLGLPTGRE
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgaatttatcatttcaagaattaggcatttccccagaacgggctacattgttagaaggc
atgggttttactgaacctacaaatattcaaacccaagcaattcctcaactattaaatggt
cgggatgtagttggtcaatcgcaaacaggaacaggtaaaaccgcggctttttctctacca
attttagagcggttagatgagaacctcaaagctgtacaagcaatagttttaaccccaact
cgtgaattagcaattcaagttcatgcggctgtttcccaatttattggtaacagttacttg
aaagcagcggctatttatggtggtcaatcaattgaccgtcaaattatgcaactcagacgt
ggggcgcaaatcgttgtcgggacaccaggacgggtcatagacttactagatcgtggtaac
ttgaagctagatcaagtcaaatggtttgtcttagatgaagctgatgaaatgttaagcatg
ggcttcattgacgatgtggaaagaattctttcccaagcccccaatgaacgccaaacagca
ttattttccgcgacaatgccaccatcaattcggatgttggtaaataaatttttgaactca
ccggtgactgtcaccgttgaacaacccaaagccgcaccgaataaaatcaatcaagtggct
tacatgattcctcgtcattggacaaaagctaaagctttacaaccaattctggaaatggaa
gatccagaaacagctttaatctttgttcgcacccggcgtacagcggcagaattaaccagt
caattgcaatctgctggtcatagtgtggatgaatatcatggtgatttgtctcaacaagcg
cgggaacgcctattaatccgtttccgtaaccgtcaagttcgttgggttgtcgctactgat
attgcagcgcgtgggttggacgttgaccaactttctcatgtaatcaactttgatttacct
gatagcgtagaaacctatgttcaccgcattggtcggactggtcgggctggaaaagaagga
acggcaatttctttagtacaatcttttgaacgccgcaaacaacaggcatttgaacgccat
aaccgtcaaacttggcaaattctctctattcctaccaaggcgcagattgaagcccaacat
atccagaagttaagaggacaagtggcagaagctttagctggggaacggttagcttccttc
ttgccgattatcagcgaaatgattgaggaatatgatgctcatgcgatcgctgcggctgct
ttacaaatcgcttacgatcaaacccgtcctgcttggttaatatcaggagtagacctgccc
gtagacgaaagcccaactcccaaacccagaattaacaaacgtggtgatggtggagaacgg
gaacgtagttctggtggtggtcgcggtggccgttcctcttggtcaaaagaaggtagaggt
aacgatgaaagacgtagtagcggtggcagtggcggtagtgctaaaccaaagttaaaaata
gcctacaatgaaccctcttctactcctagcaatcacaagttaggtttacctacgggtaga
gaatag
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