Dolichospermum sp. DL01: HEQ26_13165
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Entry
HEQ26_13165 CDS
T10442
Name
(GenBank) VacB/RNase II family 3'-5' exoribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
doc Dolichospermum sp. DL01
Brite
Enzymes [BR:
doc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
HEQ26_13165
Transfer RNA biogenesis [BR:
doc03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
HEQ26_13165
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NCBI-ProteinID:
QSV63555
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Position
2725262..2727322
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AA seq
686 aa
AA seq
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MDKGTLVEFRVKGDRRLGVIDRPDGKTSWFVVDERGQSHNIKNNQFTYTVNGQTYKPGEI
AEFLSQVQPYLDPSSLEVAWELLIEDGETVTPSQLANLLFSESTPPQCYAAHCLLSEDKL
YFKQKGDAYEPRSAAQIAERKHQIQVESQKAKGQQEFLARIEQALQGQVVEWQRLDRQRL
DALEKYATLLADVVMLKVNYDSLARACPPPASVLETMNMLGRSATPQAAFQLLIDLGLWT
SHENLFLRRSSISVQFPHQVLEVAQECWDFPPTDLDTNRLDLTHLKVYTIDDESTTEIDD
GLSWEILPDGKERLWVHIADPTRLLMPDDELDLEARKRGSTVYLPTGMIPMFPEVLATGP
MSLIQGKVCCALSFGVILDAVGSVEDYCIHTGLIKPTYRLTYQDVDEMLELGVQAEPEIE
AIANWAKIRKTWRYGQGAISINMPEAMIKVKDDDINIDVLDDSSSRQLVAEMMILAGEVA
ARYGQTHNIPLPFRGQPQPELPPEEELLLLPAGFVRSCAMRRCMPKSEMSITPVRHAGLG
LDTYTQATSPIRRYSDLLTHFQLKAHLRGEGLPFSAEQLKEVMMTVSSITQEATMVERQT
NRYYALEYLRRHPEQVWQVTVLMWLREDSNLGLILLEDLGLQLPMSFRRSVSLGENLLVK
VSLADPQKDMIHFQEIMYQEAQSVTN
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
gtggataaggggacgttagttgaatttagggttaaaggcgatcgccgtcttggagtgata
gatcgtccagacggtaaaactagttggtttgtagtagatgaacgtggtcaatcccataac
atcaaaaataaccaatttacctacacggttaacggacaaacctataaaccaggggaaatc
gctgagtttttaagtcaagttcagccttatctagacccatcaagtctggaagtagcttgg
gaactactgattgaagatggagaaactgtcactcctagccaattggcaaatctcctattt
tcggaatccacacctccccagtgttatgcagcccattgtttgttatcagaagataaactc
tatttcaaacaaaaaggagacgcttacgaaccccgcagcgcggcgcaaatagcagaacgc
aagcaccagattcaagtagaatcacaaaaagccaagggacagcaggaatttttagcccgg
atagaacaggcgctccagggacaagtggtagaatggcaacgactggatcgccagcgttta
gacgcattagaaaaatatgcgactttgctggcggatgtggtgatgctgaaagtgaactat
gattctttagctcgtgcttgtccgcctccagcctcagtattagaaactatgaatatgctg
ggacgttctgctacgccccaggcggcctttcaactcttgatagatttgggtttgtggact
tcccatgaaaacctgttcctgcgccgttcatcaatttccgttcaatttcctcatcaggta
ttagaagtggcgcaagaatgttgggattttcctcctacagatttagatacaaaccgtctc
gatctcacacatctcaaggtatataccattgatgatgaaagcactacagaaatagacgat
ggtttgagttgggagatattaccagatggtaaggaacggttatgggtgcatattgctgac
ccgacgcggttattaatgccagatgatgagttggatttggaagccagaaaacggggcagt
acagtatatttaccaacagggatgattcccatgttcccagaggtgttggccacaggtccc
atgagtttaattcaggggaaagtctgttgcgccctcagctttggggtgattttagatgca
gttgggtccgtggaagattactgtatacacactggtttaattaagcctacctaccgcctc
acctatcaagatgtggatgagatgctggagttgggagttcaagcagaaccagaaattgag
gcgatcgctaattgggcaaaaatccgcaaaacttggcgttatggtcaaggtgctatcagt
atcaatatgcccgaagcgatgatcaaagtcaaagacgatgatatcaatattgatgtttta
gatgattcttcctcccgccaattagtcgcagaaatgatgattcttgctggagaagttgcc
gcccgttacggacaaactcataatatcccgctgccctttcgcggccaaccccaaccagaa
ttacctccagaggaagaactgctcctgcttccagccggttttgtccgttcctgtgcgatg
cgtcgctgtatgcctaaaagcgaaatgagcattacaccagtgcgccatgctggtttgggt
ttagatacctacactcaagctacttcccccattcgtcgttatagcgacttactcacccac
tttcaattaaaagcacatctacgcggcgaaggtttacccttctctgctgaacaactcaaa
gaagtgatgatgacggtcagcagcatcactcaagaagcaacaatggtggaacgacaaact
aatagatattacgctttagaatatttacgtcgtcatcctgaacaagtttggcaggtaacg
gtattaatgtggttacgagaagatagcaatttaggactaattttattagaagatttgggt
ttacaattgcctatgtccttccggcgttctgtcagtttgggagaaaatttattagtgaaa
gttagtttggctgatccccaaaaagatatgattcacttccaggaaattatgtatcaggaa
gcccaatcagttacgaattag
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