Dolichospermum sp. DL01: HEQ26_13715
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Entry
HEQ26_13715 CDS
T10442
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
doc Dolichospermum sp. DL01
Brite
KEGG Orthology (KO) [BR:
doc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
doc03032
]
HEQ26_13715 (topA)
03400 DNA repair and recombination proteins [BR:
doc03400
]
HEQ26_13715 (topA)
Enzymes [BR:
doc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HEQ26_13715 (topA)
DNA replication proteins [BR:
doc03032
]
Prokaryotic type
DNA Topoisomerases
HEQ26_13715 (topA)
DNA repair and recombination proteins [BR:
doc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HEQ26_13715 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
QSV63651
LinkDB
All DBs
Position
2834996..2837182
Genome browser
AA seq
728 aa
AA seq
DB search
MPKRLLVVESPGKVKKLSQILGADWIVRASCGHIRELSNEGDDSLGFTMDGNTVRCNYIP
RDQRAKETIQQLKAAVRQVDEVVLATDPDREGETIAWHLKETLGLKDPKRVVYTEITPSA
VRNAIAHPRKLDTNLIGAGLCRDCLDKLVGYKGSPLVWALNNGAKSVGRVQSATLHLICQ
REREILAFVPQDYWSVWVDYQEGFRAFYKGTANTEKETSEPETETHDDAASNNPEKPESQ
RVLSEAEATRLVEEAKRHPHQIIHLEGKLVYRQPPPPFTTSTLQQAAGSKLKFSPDKTMQ
VAQKLYEAGLITYMRTDSVMLSPEFCASARQWLEQNDPENVPQQVAKQRSSKTAQEAHEA
IRPTDVFRPSVQLRAELPEDEFNLYVMIWKRAIASQCRPAQLRKTLVITKSGNILWQARG
QVIEFYGYAKYWLNLSKDAVLPLLQQGQKLNLAKAGHDQKQTQPPPRYSEPKLVQLMERK
GIGRPSTYAPTIATLKKRNYVELKKDNLQPTALGLEVDEFLQKALPDLLEAEFTAKMEDA
LDAISEGKNSWQHYLTTWNQSYFVPALSKAKTVVVNSSTTGKNNNFVERKYETSKTRCPN
CKNCLAKIPSSKVKKKYFLKCVSGCENIVLFWSDFHKKWEAPKTKTSSGENAPKPSAKIT
AYPCPVCKKPLEEYSYMKDGQNKTMLRCSGQDSWKDTKHKDVAYFHTAKGWWSPKFGNLN
DLNADERR
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaacgtctcctagtagttgaatctcccggaaaagtcaaaaaactgagtcaaatt
ctcggtgcagattggattgtccgcgctagttgtggacatatccgcgaactcagtaatgag
ggtgatgattcactaggatttacaatggatggtaatactgttcgctgcaattatatcccc
cgtgaccaacgggcaaaagaaacaattcaacaattaaaagccgctgttaggcaagttgat
gaagttgttttagctacagacccagacagagaaggagaaaccattgcttggcatcttaaa
gaaacgttaggattaaaagaccccaaacgagtagtttatacagagattacaccatcagca
gtgcggaatgcgatcgctcacccccgaaaacttgacactaatctcatcggtgcaggatta
tgtcgagattgtcttgataagttggtaggatacaagggtagtcccctagtttgggcatta
aataacggggcaaaaagtgtaggtagagttcaaagcgccacattacacctcatttgtcag
cgcgaaagagaaattctggcttttgtcccccaagattactggagtgtgtgggtagattat
caagaaggatttcgggctttttacaaaggtacggcaaatactgagaaagaaacatcagaa
ccagaaacggaaactcacgatgatgcagctagtaacaacccagaaaaacccgaatctcag
cgcgttctctcggaagcagaagccacaagattagttgaggaagcaaaacgtcatcctcat
caaattattcacttagaagggaaactggtttatcgtcaaccacccccaccatttaccacc
tccaccctccaacaagctgccggttcaaagttgaaattttcccctgacaaaactatgcag
gtggcacaaaaactatatgaagcaggattaattacatatatgcgaaccgattcagtgatg
ttgagtcctgaattttgtgctagtgcgcgtcaatggttggaacaaaatgatcctgagaat
gtgcctcagcaagtagccaagcagcgtagtagtaaaacggctcaggaggcacatgaagcc
attcgtcccacagatgtctttcgtccttcggtgcaattacgggcagaactaccagaagat
gagtttaacctatatgtgatgatttggaaaagagcgatcgcttcccaatgtcgtccagca
caacttcgtaaaactctggtaattacgaaatcaggtaatatcttatggcaagctagaggg
caggtaattgaattttatggttatgcaaaatattggctgaatcttagcaaagatgcagtt
ttacctttattgcaacagggacaaaaactgaatttagccaaagctggacatgaccaaaaa
caaacccaaccaccacccagatatagcgaacccaaacttgtccaattaatggaacgtaaa
ggcattggtcgtcctagcacttatgctccgacaattgctactttaaagaaacgcaattat
gtggagttaaaaaaagataatcttcaacccacagctttgggtttagaagtagatgaattt
ttacaaaaggctttaccagatttattagaagcagaatttactgctaaaatggaagatgcc
ttagatgcaatttctgaaggcaaaaactcttggcaacattacttaactacttggaatcaa
agttattttgttcctgcactttccaaagctaaaactgtggttgttaattcatcaactaca
ggtaaaaataataattttgttgagcgtaaatatgaaacttctaaaactcgttgtcctaat
tgtaagaactgtttagctaaaattcccagcagtaaagttaaaaagaaatactttcttaaa
tgtgtgagtggctgtgaaaacattgtgctattttggagtgattttcacaaaaagtgggaa
gcaccgaaaactaaaacatcttcaggtgaaaatgctcccaaaccttcagcaaaaatcact
gcatatccctgtcctgtatgcaagaaacctttggaggaatacagttatatgaaagatggg
caaaataaaactatgttgcggtgttctggtcaggattcatggaaggatacgaaacataag
gatgtggcttattttcatactgctaaaggatggtggagtcctaaatttgggaatttaaat
gatttgaacgcagatgaacgcagataa
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