Dolichospermum sp. DL01: HEQ26_20020
Help
Entry
HEQ26_20020 CDS
T10442
Name
(GenBank) ribosome assembly protein 4
Organism
doc Dolichospermum sp. DL01
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_EML
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_SPT8
nSTAND1
Beta-prop_TEP1_C
Beta-prop_NWD2_C
RMC1_N
Beta-prop_WDR19_1st
Beta-prop_DCAF4
WD40_RFWD3
eIF2A
PROPPIN
Beta-prop_NUP159_NUP214
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
Beta-prop_WDR75_2nd
Beta-prop_Vps41
Beta-prop_HPS5
WD40_like
WD_LRWD1
Beta-prop_DCAF12
Cytochrom_D1
DUF1513
AAA_16
TPR_12
RsgA_GTPase
Beta-prop_NOL10_N
AAA_22
Nucleoporin_N
NACHT
ATPase_2
NB-ARC
AAA_29
Bflower_3
AAA_23
Motif
Other DBs
NCBI-ProteinID:
QSV64692
LinkDB
All DBs
Position
complement(4190143..4195098)
Genome browser
AA seq
1651 aa
AA seq
DB search
MTNSQQLEDLAWSIEASQGEFKLILAKCNYLNLQNQLIQELQKICQIEIHILRLQSSERT
LYNAIREEFNQEIAALMIVGWESLPNLSKMFSSANQVREEFRNNCPYPLVLWINNQIYQQ
IMESAPDLESWGITINFSLPFDELINLLKSIINKILNDDLNVNLQELELALQDLQKYGQD
LEPEFQANCNFLKGFIAYNKKQLDIAINYYQQSWNFWQTTDNLEISGKILYNLTICNYEK
LRPNPPTPFPSREGGEIIICIQRTLEKFKNAQRLDLIANSLSRFGLILQDLQAWEQLKTL
SQQALEIHQAENNILKIAEDYIFLATANFEQSNFQEAAKIANQGIGVIHELSLLNYYRQS
LFLILAQAQEKLQQYEQAIKNLELAKNIGVINNHPKLYVKILNLLQKLLFQKTEYLEAFN
TKLESRSIEQQFGLRAFIGAGWLKPAKNTSFVNKDNISPEIEASGRKIDVDELLARIGRT
DKKIIVIHGQSGVGKSSLVNAGLIPALENKAIGFQDNLPVTIRVYNSWFTELAKELLDVL
PENLKSEDLKLDTQEKFVLKLVEIEKYRRTVLIFDQFEEFFFVCPDDKARTEFFQFLGKC
LNHKNIGSLRVILSLRVDYLHLLLECDEITDMNIIGDGILSKNVLYKLGNLTPENAKTTI
ESLTKKTTFQLEPDLINRLVEDLAGELGSVRPIELQIVGAQLETENITTLATYQQIGNKQ
ELVKSYLGEIVNDCGKKNQELAELLLYFLTDEQGTRPLKTKAELEENLQSLLERDKTEAE
NNLDLVLEIFVKSGLVVLLPENPCERYQLVHDYLALFIRQQKEPKLKAVIAELEQEKQQR
KIGEAKLNRFLKIALAGSVAAGIALTLLTVTAWDAAKRAETQKQQADINAIQALTKSSEA
QFALKDTGSALIESLKAGGKLKLASSAKSDTQVPTIAALRQAVYLQRDEKPENRALAVNT
LKGHESEVYSVGFSPDGKQLASGSFDKTIKIWDVTTGKLLNTLKGHESSVNSVEFSPDGK
QLASGSFDKTIKIWDVTTGKVLNTLKGHEGEVRSVGFSPDGKKLASGSNDKTIKIWDVTT
GKVLNTLNGHESEVISVGFSPDGKKLASGSADKTIKIWDVTTGKVLNTLPSERYANKGHE
GYVNSVGFSPDGKQLASGSSDNTIKIWNVTTGKVVNTLKGHKVYVNSVGFSPDGKQLVSG
SSDSTIKIWDVTTGEVLNTLKGHENWVRSVGFSPDGQQLASGSDDNTIKIWDVTTGKVLK
TLPSERYANKGHESGVNSVEFSPDGKQILAFGSADMTIKIWDVTTGKVLKDYEDVVTSVG
FSPDGQQLASGSGDNTIKIWNVTTGKVLNTLKGHKGYVRSVGFSPDGKQILASGSDDDTI
KIWDVTTGKVLNTLKGHESGVNSVEFSPDGEKLASGSGDNTIKIWDVTTGKVLNTLKGHD
SSSVVSGVNSVEFSPDGQQLVSGSGDKTIKIWDVTTGKVLNTLKGHEGTVRSVGFSPDGQ
QLASGSNDNTIKIWGVTTGKVLNTLKGHEGWVYSVGFSPDGKQLASGSYDKTIILWDLDL
DNLVTSGCNLLNNYLIGNPQVLAELKDCQTPSRLLLAATVLVIQGENLAANDDMNGALAN
FRTAQTWDKNLQFDPQAKAQEFANKGKAKRK
NT seq
4956 nt
NT seq
+upstream
nt +downstream
nt
atgacaaactcacagcaattagaagatttagcatggtctatagaagcatcccaaggagaa
tttaagctgattttagctaaatgcaattatctcaacttacaaaatcaactcattcaagaa
ttacaaaaaatctgtcaaattgaaattcatattttacgacttcaatcatcagaaagaaca
ttatataatgcgattcgagaagaatttaatcaggaaattgcagcattaatgattgtcggt
tgggaatctttaccgaatttatcaaagatgttcagttcagctaatcaagtcagggaagaa
tttagaaataattgtccatatcccctagtgctatggattaataatcaaatatatcaacaa
atcatggaatctgcacctgatttagaaagttggggaattactatcaatttctctcttcct
tttgatgaattaattaatttactcaaatcaataataaataaaatattaaatgatgatttg
aatgtaaatctacaagaacttgaattagcattacaagacttacaaaaatatggacaagat
ttagaaccagaatttcaagctaattgtaatttcttaaaaggatttattgcatataacaaa
aaacaattagatatagctattaattactatcaacaaagttggaatttttggcaaacaacc
gataatttagaaatttcaggaaaaatactttataatctgacaatttgcaattatgaaaaa
ttaagacctaaccccccaacccccttccctagcagggaagggggagaaataataatttgt
attcaacgaacgttagaaaagttcaaaaatgctcaacgtctggatttaattgctaattct
ttatcaagatttgggttaattctccaagatttacaagcatgggaacaattaaaaacatta
tctcaacaagctttagaaatacatcaagctgaaaataatatcttgaaaatagcagaagat
tatatatttttagcaacagctaattttgaacaatcaaattttcaagaagcagccaaaatt
gctaatcaagggataggggtaattcatgagttatccctactaaattattatcgtcaaagt
ctatttttaattctagcacaagctcaagaaaaattacaacaatatgaacaagcaattaaa
aatttagaattggctaaaaatatcggggttatcaataatcaccccaagctttatgttaaa
attctcaatcttttacaaaaactattatttcaaaaaacagaatatctggaagcttttaat
accaaattagaaagtcgttctattgaacaacaatttggtttgcgggcgtttattggtgca
ggttggttaaaaccagcaaaaaatacatcttttgtgaataaagacaatatttctccagaa
attgaagcatctggacggaaaatagatgtagatgaattactagcaagaattggtagaact
gataaaaaaattattgtcattcatggacagtcaggagttggaaaaagttctctagttaat
gctgggttaattcctgcattggaaaataaagccataggttttcaagataatttacctgtg
acgattagagtttataatagttggtttacagaattagcaaaagaattattagatgtatta
ccagaaaacttaaaatcagaagatttaaaattagatactcaggaaaaatttgttttaaaa
ttggtagaaattgaaaaataccgaagaacagtattaatctttgaccaatttgaagaattt
ttctttgtgtgtcctgacgataaagctagaacagagttttttcagtttttagggaaatgt
ctaaatcataaaaatattggatctttgcgagtaattttatctttgcgggtagattattta
catcttttattagaatgtgatgaaattaccgatatgaatattattggtgatggtattctg
agtaaaaatgtgctttataaattgggaaacttaacaccagaaaatgctaaaactacgatt
gaaagtttaactaaaaaaacaacttttcagttagaaccggatttaattaaccgactggta
gaagatttagcgggagaattaggttcagtccgtcccattgaattacaaattgtgggagcg
caattagaaacagaaaatatcaccacattagcaacatatcagcaaattggtaacaaacaa
gaattggtgaaaagttatttaggggaaatagtcaatgattgcggtaagaaaaatcaagaa
cttgcggaattattactttattttctcacagacgaacaaggaacaagaccgttaaaaact
aaggcagaattagaagaaaatttacaatcattattagaacgagataaaaccgaagctgag
aataacttagatttagtattagagatatttgtcaaatctggtttagtggtgttgttaccg
gaaaacccctgtgaacgttatcaattagttcatgattatttggctttgtttattcgtcaa
caaaaagaaccgaaattaaaagcggtgatagcagaactggaacaggaaaaacaacaaaga
aaaattggtgaagctaaactcaatcgctttctcaaaattgccctggcaggttcagtagcc
gcaggaatagcattaaccttgctaacagtaacagcttgggatgctgcaaagagggcagaa
actcagaaacaacaagctgatattaatgcaattcaagccttaactaaatctagtgaagcc
cagtttgccttaaaagacaccggaagcgccttaatagaaagcttgaaagctggtggaaaa
ctcaaacttgcatcttcggcaaaatctgatactcaagtaccaacaatagcagcattaagg
caagcggtatatttgcaacgtgatgaaaagccggaaaatagagccttagcagtcaatacc
ctgaaaggtcatgagagtgaggtctatagtgtgggatttagccccgacggcaaacaattg
gcttctgggagttttgacaagacgatcaaaatctgggacgtgaccacagggaaactcctg
aataccctgaaaggtcatgagagttcggtcaatagtgtggaatttagccccgacggcaaa
caattggcttctgggagttttgacaagacgatcaaaatctgggacgtgaccacagggaaa
gtcctgaataccctgaaaggtcatgagggtgaggtcaggagtgtgggatttagccccgac
ggcaaaaaactggcttctgggagtaatgacaagacgatcaaaatctgggacgtgaccaca
gggaaagtcctgaataccctgaacggtcatgagagtgaggtcattagtgtgggatttagc
cccgacggcaaaaaactggcttctgggagtgctgacaagacgattaaaatctgggacgtg
accacagggaaagtcctgaatacccttccttcggaacgctacgctaacaaaggtcatgag
ggttatgtcaatagtgtgggatttagccccgacggcaaacaactggcttctgggagttca
gacaacacgatcaaaatctggaacgtgaccacagggaaagtcgtgaataccctcaaaggt
cataaggtttatgtcaatagtgtgggatttagccccgacggcaaacaactggtttctggg
agttcagacagcacgatcaaaatctgggacgtaaccacaggggaagtcctgaataccctg
aaaggtcatgagaattgggtcaggagtgtgggatttagccccgacggacaacaactggct
tctgggagtgatgacaacaccatcaaaatctgggacgtaaccacagggaaagtcctgaag
acccttccttcggaacgctacgctaacaaaggtcatgagagtggggtcaatagtgtggaa
tttagccccgacggcaaacaaatactggcttttgggagtgctgacatgacgatcaaaatc
tgggacgtgaccacagggaaagtcctgaaagattatgaggatgtggtcactagtgtggga
tttagccccgacggacaacaactggcttctgggagtggtgacaacaccatcaaaatctgg
aacgtgaccacagggaaagtcctgaataccctaaaaggtcataagggttatgtcaggagt
gtgggatttagccccgacggcaaacaaatactggcttctgggagtgatgacgacacgatc
aaaatctgggacgtaaccacagggaaagtcctcaatactctcaaaggtcatgagagtggg
gtcaatagtgtggaatttagccccgacggcgaaaaactggcttctgggagtggtgataac
accatcaaaatctgggatgtgactacagggaaagtcctgaataccctgaaaggtcatgat
agttcgagcgtcgtaagtggggtcaatagtgtggaatttagccccgacggacaacaactg
gtttctgggagtggtgacaagacgatcaaaatctgggacgtaaccacagggaaagtcctg
aataccctgaaaggtcatgagggtacggtcaggagtgtgggatttagcccggacggacaa
caactggcttctgggagtaatgacaacaccatcaaaatctggggcgtaaccacagggaaa
gtcctgaataccctgaaaggtcatgagggttgggtctatagtgtgggatttagccccgac
ggcaaacaactggcttctgggagttatgacaagacgatcattttatgggatttggattta
gataatttagtcaccagtggttgcaatttgctgaataattatttgattggtaatcctcaa
gtgttggcagaattaaaagattgccaaactccatctcggttattattagcagcaacggtg
ttagtgatccaaggtgagaacttggcagcaaatgatgatatgaatggggctttagctaat
ttccgcaccgcccaaacatgggataaaaatttacaatttgacccccaagcaaaagcacag
gagtttgctaacaaaggcaaagctaaacgcaagtga
DBGET
integrated database retrieval system