Dolichospermum sp. DL01: HEQ26_21465
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Entry
HEQ26_21465 CDS
T10442
Name
(GenBank) DNA-directed RNA polymerase subunit gamma
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
doc Dolichospermum sp. DL01
Pathway
doc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
doc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HEQ26_21465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
doc03021
]
HEQ26_21465
03400 DNA repair and recombination proteins [BR:
doc03400
]
HEQ26_21465
Enzymes [BR:
doc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HEQ26_21465
Transcription machinery [BR:
doc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HEQ26_21465
DNA repair and recombination proteins [BR:
doc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HEQ26_21465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
Cas9-BH
Motif
Other DBs
NCBI-ProteinID:
QSV64935
LinkDB
All DBs
Position
complement(4530824..4532716)
Genome browser
AA seq
630 aa
AA seq
DB search
MRSPQTNQFDYVKIGIASPERIRQWGERTLPNGQLVGEVTKPETINYRTLKPEMDGLFCE
RIFGPAKDWECHCGKYKRVRHRGIVCERCGVEVTESRVRRHRMGFIKLAAPVAHVWYLKG
IPSYIAILLDMPLRDVEQIVYFNSYCVLAPGNADTLSYKQLLSEDQWLEIEDAIYSEDSQ
LEGVEVGIGAEALLRLLADINLEQEAETLRDEIEKAKGQKRAKLIKRLRVIDNFIATGSQ
PEWMVMEIIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLARLQEILAPEIIVR
NEKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFRQNLLGKRVDYSGRS
VIVVGPNLKIHQCGLPREMAIELFQPFVINRLIRSGMVNNIKAAKKLISRNDPSVWDVLQ
EVIEGHPVMLNRAPTLHRLGIQAFEPILVEGRAIQLHPLVCPAFNADFDGDQMAVHVPLS
LESQAEARLLMLASNNILSPATGKPIVTPSQDMVLGAYYLTAENPKATKGAGKYFSSLDD
VIMAYEAKQVELHAYIYVRFDGEIDSGEPDTEPVEVIEDKDAKGRLMSRTLIYKFRRVRE
DGEGNLISQYIYTTPGRAIYNQAIQEAIDA
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgagatccccccaaactaatcaatttgactacgtaaaaattggcatagcttcaccagaa
cgcatccgtcaatggggtgaacggactttacccaatggacaacttgtaggtgaagttacc
aagccagaaactattaattaccgcaccctcaaaccagaaatggatggtttgttttgcgag
cgcatctttggaccagctaaggattgggaatgccattgtggtaagtacaaacgggtgcgc
catagagggattgtctgcgagcgctgtggtgtagaagttacagagtcccgcgtccgtcgc
cacaggatgggttttattaagttggctgcccctgtggctcatgtttggtatctcaaaggg
attcctagctatattgctattctcctagatatgccattgcgggatgtggagcagattgtt
tatttcaactcctactgcgttttagctccgggcaacgctgatactctcagttacaaacaa
ctgttgagcgaagaccaatggttagaaatcgaagatgctatctacagtgaagattcccag
ttagagggtgtggaagttggcattggggctgaagctctgttgcggctgttggcagatatt
aatttggagcaagaagcggaaaccctgcgggatgaaatcgaaaaggccaagggtcagaaa
cgggcaaaattaattaaacggctgcgggtaattgataatttcatcgctaccggttctcag
ccagaatggatggtgatggaaattattcccgtcattcccccagatttgcgccccatggtg
cagctagatggaggcagatttgccaccagcgatttaaatgatttgtaccgccgggtgatt
aatcgcaacaaccgtttggctagacttcaggaaattctcgcgccggagattattgtccgc
aacgagaaacggatgctgcaagaggctgtggatgccttgattgacaatggtcggcgggga
cggactgtggtgggggctaataaccgtccgctgaaatccttgtccgatattattgaggga
aaacaaggacgtttccgccaaaacctgctgggtaaacgggtggactattcgggacggtcg
gtaattgtggtcggtccgaatctgaagattcaccagtgcggtctacccagagaaatggcc
attgagttgttccagccctttgtgatcaatcgtctgattcgttccggcatggtgaacaat
atcaaggcagcgaaaaagctgatttctcgcaatgatcccagtgtttgggatgtgttgcag
gaagtaattgaggggcatccagtgatgctaaaccgagcgccaacgttgcaccgattgggg
attcaggcctttgaaccgattttggtagaagggagagccattcaactccatcctttagtc
tgtcccgcctttaatgctgactttgacggtgaccaaatggcggttcatgttcccttgtcc
ttagagagtcaagctgaagcccgactgttgatgctggcttctaataatattttgtcacca
gcaacgggcaaaccgattgtgactcctagccaagatatggtgttgggagcatattatttg
acagcggaaaaccccaaggcaaccaagggggcgggtaagtatttctcctctttggatgat
gtaattatggcctatgaggcgaaacaggtagagcttcatgcctatatttatgtgcgtttt
gatggggaaattgattcgggtgaaccggatactgaacctgtggaggtaattgaggacaaa
gacgctaagggcaggctgatgagtcggactctgatttataagttccgacgggtgcgggaa
gatggggaagggaatttgatttctcagtatatttatacgactccaggacgagcaatttat
aaccaggcaattcaggaagcgatagacgcttaa
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