Dolichospermum sp. DL01: HEQ26_22220
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Entry
HEQ26_22220 CDS
T10442
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
doc Dolichospermum sp. DL01
Pathway
doc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
doc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HEQ26_22220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
doc03019
]
HEQ26_22220
03400 DNA repair and recombination proteins [BR:
doc03400
]
HEQ26_22220
Enzymes [BR:
doc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HEQ26_22220
Messenger RNA biogenesis [BR:
doc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HEQ26_22220
DNA repair and recombination proteins [BR:
doc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HEQ26_22220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
QSV65061
LinkDB
All DBs
Position
complement(4684231..4685673)
Genome browser
AA seq
480 aa
AA seq
DB search
MNLPVTQSWQDVRAALKAIWGYDDFRPPQKEIVNCLISQKDSLIIMPTGGGKSICFQLPA
LLQTGLTLIVSPLVALMENQVEELRQLSQKAALLHSELTPSQRQATLQALEKQQLRLLYL
SPETLLSPAVWKKLCNPQLQINGLILDEAHCLVQWGDSFRPAYRRLGAVREALLKSKPPG
TKISIAAFTATADPLAQKIISTVLKLDKPEIFRINPYRENLNPIVRIAWTPKGRKQQLLK
FIQKRPNQVGLIYVRTRRDSENLTEWLTENGFHTASYHAGLSPTERRNIEASWLGGKILF
VVCTCAFGMGINKSNVRWVVHFHAPYLLSEYVQEIGRAGRDGKRADVLTLVSEPTGFLDA
EDKQRQKFFAEQMKSQQQKAQQLAKQLPSQGEINTVIKEFPNSAVALSLLHSNGQLEWLD
PFHYSMSLPSGKPAKTQLQAAKQMSEYLTTKKCRWQFLLNAFGFETTTNWRCGHCDNCGN
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcccagtaacacaatcttggcaagatgttcgcgcagcattaaaagcgatttgg
ggatatgacgattttcgtcccccccaaaaagaaattgttaactgtttaatatcacaaaaa
gattcactaattattatgcccacaggtggggggaagtcaatttgttttcaacttcctgcc
ctactacaaacaggattaactttaatagtttctcctttggtggcattaatggaaaaccaa
gttgaggaattacggcaactatcacaaaaagcagcacttttacacagtgaattaactcca
tctcaacgccaggcaactttgcaagctttagaaaaacagcaattaagattattgtattta
tcaccagaaaccttacttagtccagcagtgtggaaaaagttatgtaatccccaactgcaa
attaatggtttaattctggatgaagcccattgtttagtgcagtggggtgatagttttcgt
ccagcttatcggcgtttaggggctgtgcgtgaagcgttactaaaatcaaaaccaccggga
acaaaaattagtatagcagcttttacggcaacggctgatcctttagcccaaaagattatt
tctacagttttaaaattagacaaacctgagatttttcggattaatccctatcgggaaaat
ttaaatcctattgtccgaattgcttggactcctaaagggagaaaacaacaattattaaag
tttattcaaaaacgaccaaatcaagttggtttaatttatgtacggactcgaagagatagt
gaaaatttaacggaatggttaacagaaaatggctttcatactgctagttatcatgcagga
ttaagtccaacagaacgccggaatattgaagctagttggttaggtggaaaaatccttttt
gtggtgtgtacttgtgcttttggcatggggataaacaagtcaaatgtccgctgggttgtc
cattttcatgcgccctatttattatctgaatatgtgcaagaaataggcagggctggaaga
gatggaaaacgtgctgatgttttaactttggtaagtgaaccaacaggatttttagatgct
gaggataagcaaagacagaaattttttgcagaacaaatgaaatctcaacaacaaaaagcc
caacaattagcgaaacaattaccatcccaaggagaaataaatactgtaattaaagaattt
cccaatagtgctgtggcactttctcttctccatagtaatggacaactagaatggcttgat
ccttttcattattctatgtctttgccgtcaggaaaaccagcaaaaacacaattacaagct
gctaaacaaatgagtgaatatcttactactaaaaaatgtcgttggcagtttttattaaat
gcttttgggtttgaaacaacgactaattggcgttgtggacattgtgataattgtggaaat
taa
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