Dokdonia sp. Dokd-P16: DCS32_03955
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Entry
DCS32_03955 CDS
T05432
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K02005
HlyD family secretion protein
Organism
dod
Dokdonia sp. Dokd-P16
Brite
KEGG Orthology (KO) [BR:
dod00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
DCS32_03955
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Ortholog
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GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_AprE
HH_MFP_RND
YknX_C
HH_CzcB
BSH_CzcB
Beta-barrel_YknX
HH_YBHG
HH_EMRA
RND-MFP_C
CzcB_C
BSH_CusB
BSH_LcnD
Biotin_lipoyl
Beta-barrel_RND_2
PTS_EIIA_1
BSH_YknX
BSH_YhbJ
OEP
SHOCT
B2
Motif
Other DBs
NCBI-ProteinID:
AWH73342
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Position
complement(862147..863433)
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AA seq
428 aa
AA seq
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MSKKTLFILLGIVAIVVIALIAGKKSGAFGKSGNFKAVEVQKLERATIIETVAATGKIQP
EIEVKLSSEVSGEIIDLPIKEGQDVKKGDLLVKINPDLVQAAVSQSRAALQNSRAGLSQA
EASLNQAKLTFNRNKPLFDKGVISKADFERAQSDLDIAQANRQSAFYNVQSVAAQVKQAT
DNLGRTSIFAPRDGTISMLNVELGERVVGTAQMAGTEIVRVANLNNMEVEVDVNENDIVK
IAIGDSTIVEVDAYLKTKFAGVVTEIANSAQATLTADQVTNFKVKVRILEESYKHLLEGK
KDTYSPFRPGMTATVDIITKKRNDILAAPISAIVVKTDTSATRSTMPKSTTTAGAAEEKF
ECVFVKSGGEAKLKVVTTGIQDDSKIEILTGLEEGDEIIIGPYSLVTKTLKTGDKVEVKG
EEKNESEE
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaaaacacttttcattttactaggtattgttgctattgtagttatagcatta
atcgcaggtaaaaaatctggagctttcggtaagtctggtaatttcaaggctgtagaggtg
cagaagctagagcgagcaactatcattgagactgtggccgctacgggtaaaatacagcca
gagatagaagtaaaactatcatcagaagtatctggagaaatcatagatcttcctattaaa
gaaggtcaagatgtaaagaaaggagacctacttgtaaaaatcaatcctgacttagtgcaa
gcagcagtaagccagagtcgcgcagcgttacaaaatagccgtgcaggattatcacaagca
gaagctagccttaatcaagccaagcttacttttaatcgtaataagccactttttgataaa
ggagtaatctcaaaagcagattttgaaagagcacagtctgatctcgatatcgcgcaagca
aatcgtcagagtgcgttctataacgtacagagtgtagctgcacaagtaaagcaagctaca
gataatctagggcgtacttctatttttgcaccacgtgatggtacaatttctatgcttaat
gtagagctgggagaacgtgtagtaggtactgctcaaatggcaggaacagaaattgtacgt
gtagcaaaccttaataatatggaggttgaggtagatgtaaatgaaaatgatattgtaaaa
attgcaataggagattcaacgatcgtagaggtagatgcatacctaaaaacaaaatttgct
ggtgtggttacagaaattgcaaactcggctcaagcaacactcactgcagatcaggttaca
aattttaaagtaaaagtgcgtattctagaagaatcatataagcacttgctagaaggtaaa
aaggatacatattcgcctttcagacctggtatgacggctactgtagatatcattactaag
aagcgtaacgatattcttgcagcacctataagtgctattgtagtaaaaacagatactagt
gctacaagaagcactatgccaaagtctacaacaactgcaggagcggcagaggagaaattt
gaatgtgtatttgtgaagagtggtggtgaagcaaagttgaaggtggtaaccacaggaata
caagatgactctaaaattgaaatcttaacaggtctagaagaaggagatgagatcataata
ggcccttacagtcttgtaactaaaacactcaaaacaggagataaagttgaggtaaaggga
gaagaaaaaaacgaatctgaagagtaa
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