Dokdonia sp. Dokd-P16: DCS32_06085
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Entry
DCS32_06085 CDS
T05432
Name
(GenBank) lytic transglycosylase
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
dod
Dokdonia sp. Dokd-P16
Brite
KEGG Orthology (KO) [BR:
dod00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dod01011
]
DCS32_06085
Enzymes [BR:
dod01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
DCS32_06085
Peptidoglycan biosynthesis and degradation proteins [BR:
dod01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
DCS32_06085
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Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM2_CERK1_LYK3_4_5
Motif
Other DBs
NCBI-ProteinID:
AWH73740
UniProt:
A0A2S1QB51
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Position
complement(1331671..1333293)
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AA seq
540 aa
AA seq
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MTLMQHNFKISLVASILLFSAFAKAQDTLSYEAYKQKAPVIKEDKKPALQRDTIKVVETV
ITNTISQDLPQVLLDTQVRDSITFNLPDNPQAALIDMRWRKELARMDLFDSINNIRESHT
YQPEVNLELPTDTLKKRLAEINARTPFNVEYNPSLESVINRYLKRHKPAMEKLMAVSQFY
FPMFEERLDKYDIPLEMKYLAIVESALRPRAKSRVGATGLWQFMFATGKMFNLEVNSYVD
DRMDPIAATEAACAYLSQLYDIHGDWDLALASYNSGPGNVSKAIRRSGGATNYWNIRKNL
PRETAGYVPAFLATMYLFEYADEHGYTPERAPINYFATDTIHIKQSIALDQVSSIVGIPL
EIVQFLNPQYKLDIIPVVKDKKYYVRLPIESVGKFVQNEQAIYAFAKAELDKREKPLPEV
LTASSQVRYRVRSGDYLGKIASKYGVGVSQIKKWNNLRSNALKIGQRLTIYPRKPVTNSS
ASSSTKTVSLKGKKTYTVQNGDSLWKIANKFPGVSIDNIKVWNDISSSKLKPGMKLRVSK
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgactctaatgcaacataattttaaaatatccctagtagcttctatactcttgttttcc
gctttcgcgaaagcgcaagacaccctctcatatgaggcttataaacagaaagctccggtt
ataaaagaagataaaaaaccggcactccaaagagatactatcaaagtagtagaaactgtc
attaccaatacaatctctcaagatttacctcaagtattactagatacacaagtgagagat
tctataacgttcaacttaccagataatcctcaagcagcacttatagatatgcgctggcgt
aaggaactggcaagaatggatttatttgattctataaataatatacgtgaaagtcacaca
taccagcctgaagtaaatctagaacttcctacagacacgcttaaaaagcgccttgccgaa
attaatgcgcgtactccatttaacgtggagtataacccatcgctagaaagcgttataaac
cgctatttaaagcgtcacaaaccagctatggagaagcttatggcagtaagccagttttac
ttccctatgtttgaggagcgtctggataagtatgacatccctctagagatgaaatatctc
gccattgtagaaagtgcactgcgaccaagagcaaaatctagagtaggagcaacagggtta
tggcaatttatgtttgcaacgggtaaaatgtttaacctcgaggtaaacagctatgtagat
gatcgcatggatcctattgcagcaacagaggctgcttgtgcttacctatcacaactctat
gacattcatggagactgggatcttgcactggcttcttataactctggtccaggaaatgtg
tctaaagccataagacgttctggaggtgctacaaattactggaatattagaaagaattta
cctcgagaaaccgctggttatgtacctgcttttctagccaccatgtatctttttgaatat
gcagatgagcatggatacacaccagaaagagcacctataaactactttgcaacagatacc
attcacataaaacaaagtatcgcgctagatcaggtttctagtattgtgggaattcctttg
gagattgttcaatttctaaatccgcagtataaattggatattattccggtggtaaaggac
aagaaatattacgtgcgacttcctatcgagagtgtgggtaaatttgtacaaaatgaacag
gctatttacgctttcgcgaaagctgaactagacaaaagagaaaagccattgccagaagta
cttacagcaagctctcaggtaagataccgagtgcgtagcggtgattatctaggaaagata
gcaagcaaatacggagtaggtgtaagccagattaagaagtggaacaacctacgatcaaat
gctcttaaaataggtcagcgactaaccatttaccctagaaagccggtcacaaacagtagt
gcaagtagtagcacaaaaacggtttcattaaagggaaagaaaacatatactgttcaaaat
ggtgactcactctggaaaattgcaaataagtttcctggggtaagcatcgataatattaaa
gtttggaatgatattagtagtagtaaattgaagcccggaatgaaactacgtgtttctaaa
taa
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