Dokdonia sp. Dokd-P16: DCS32_06420
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Entry
DCS32_06420 CDS
T05432
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
dod
Dokdonia sp. Dokd-P16
Brite
KEGG Orthology (KO) [BR:
dod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dod03400
]
DCS32_06420
Enzymes [BR:
dod01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DCS32_06420
DNA repair and recombination proteins [BR:
dod03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
DCS32_06420
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
DUF2800
Motif
Other DBs
NCBI-ProteinID:
AWH73800
UniProt:
A0A2S1QBA3
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All DBs
Position
complement(1405018..1407714)
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AA seq
898 aa
AA seq
DB search
MQTFIDVVLDKEQGSENENIIYILPSRRAGNTLTKKIASRAITTSFAPKVFSIEEFISHV
TGLKSASNIDLIFILFESYKEVVAKKKLADFQTFCGWAQSILSDFNEIDRFLLNQSEVFN
HLKDIKELSDHWSSSKNELVLNYIDFWNSLFDIYTVFCSKSLDKGAVHQGYVYRQAVETI
EHYIHSSPNVRHVFIGFNALNTAEQQLIQALLSEGNAEIYWDTEKSFLNNPFHETNSFVK
NYKSKWSYYNSNPFNWTFDNYSSHKNIATYACSQDILQAKTLGTILSKISSQELSNTAIV
LGEESLLLPVLNALPRTIQKVNITMGLPLSKTPTASFFDQLITLKKNPHKNGYYFKDVLN
ILRNPLSAALLGSQTEHLEHEIITNNLIFISVPRLAELSSNSTDTVFNLLFQTWNENPKE
AVINCIRIIEALRALFDTGNNTLQLEYIYGFYVAFNKLKQLMDAQDHIKDISTFIHFYRE
ILSSETIDLRGDPEQGLQIMGVLESRVLDYKHVIITSVNEGILPSGKSQNSYIPYDLKKL
YNLPTYSEKDAVYAYHFYHLLHRANTVDLLYTTHSTGLGSSEKSRFIRQIEEEGIHNIKK
HVVTPSTIKIEERLPHIPKDTAIIDSLKNLFKKGISPSALTTYLRDPIVFYERYVLGVNS
SNEVEETVAANTMGTIVHNTLEELYKPHVGQQLTVTIIEELLTMIEVEVRNQFKLVYGLN
HITEGKNKIVYAIVTRYVENYLKREKGLLKKGDTVILKSVEDDLRNIQLTEDIFLRGKVD
LVEQRNNNVNIVDYKTGKVAQKDLNLSAFNDLLLPEGKFEKAFQVLMYAYMLNKKKPLDF
PVSVGIISFKNLQSGYLPFRYNKNEQVTEDTLLEFEVVLKSLIAEILNPEIPFTQREV
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacttttattgacgtagtacttgataaagaacaaggttctgaaaacgagaatatc
atttatatccttcctagccgtcgtgcaggaaatacacttacaaaaaaaatagcttcacga
gcaatcaccacttcgtttgcgcctaaagttttttcaatagaagaatttataagtcatgtt
accggtttaaaatcagctagtaacatagacttaatatttatcctatttgaaagttataaa
gaagttgtagccaagaaaaagcttgccgatttccaaacgttctgtggatgggctcaatcc
attttgagtgacttcaacgagatagacagatttctcttaaatcagtcagaagtatttaat
catctaaaagatattaaagaactctcagatcactggtcttcctcaaagaatgaattagta
ctcaactatattgatttttggaatagcttatttgacatctatacggtcttttgttcaaaa
tcattagataagggtgcagtacatcaaggttatgtctacagacaagctgtagagactata
gagcactatatacattcgtcacctaatgttagacatgtgtttataggattcaacgcttta
aatactgctgaacaacaactcatccaagctctactctcagagggcaacgcagaaatatac
tgggataccgaaaaatcttttttgaataatcccttccatgagactaactcatttgtaaaa
aactataaatctaagtggtcatactataactcaaatccttttaactggacctttgataat
tacagctctcataaaaatatcgctacatatgcatgctctcaagatattttacaagctaaa
acattaggaacaattctttctaaaatctcaagtcaagaactatctaacaccgcgattgta
ttaggagaagaatctcttttattaccagttcttaatgccttgcctcgcactatacaaaag
gtgaatattactatgggcttacctttgagtaagacacccacagcttccttttttgaccag
cttattaccttaaaaaagaatcctcataaaaatggttattattttaaggatgttttaaat
attcttcgcaatccattatctgctgcactgctagggtcacagacagagcatttagagcat
gaaattataactaataatcttatattcattagtgttcctcgacttgctgagcttagtagt
aatagcacagatactgttttcaatttattatttcaaacttggaatgaaaaccctaaagag
gctgtgataaattgtatacgtatcatagaagcactgagggcattatttgatactggtaac
aacacactacagcttgaatacatttatggtttttacgttgcatttaataagctcaagcag
cttatggatgcgcaggatcatattaaagatatatcaacgttcattcacttttatagagaa
atattatcgtcagaaactattgatttgcggggtgatcctgagcaaggtcttcagattatg
ggagtattagagtcaagggttcttgattataaacatgtcattataacttctgtaaatgag
ggaatattaccttctggtaaaagtcagaattcatacatcccttatgacttaaaaaaactc
tataatttaccgacctactcagagaaggatgccgtttatgcatatcacttctatcatttg
ttacacagagcaaacactgtagatttactatatacaacacatagtaccggtttaggtagc
agtgaaaaaagtcgatttataagacaaatagaagaggaaggtatacacaatataaagaaa
cacgtcgttactccatctacaataaagattgaagagcgattacctcacattcctaaggac
acagctattattgattctcttaagaacctatttaaaaaaggtatttcaccctctgcgctc
acgacttacctgagagatcctatcgtgttttatgaacgatatgttctcggcgtcaattcg
agtaatgaagtagaagaaactgtggcggcaaataccatgggtaccatcgttcataataca
cttgaagaattatataaaccccacgtaggacaacaattaactgttaccatcattgaagaa
ttacttacaatgatagaagttgaagttcgcaaccaatttaaactagtatatggtctcaat
catatcactgagggtaaaaataagatagtctatgcaatagtaactcgatatgttgagaat
tacctcaaaagagaaaaaggactccttaaaaagggtgatacagtaattcttaaatctgta
gaagatgatttaagaaacatacaacttacggaggatatatttttaagaggaaaagtagac
cttgtagaacaacgcaataacaatgttaatatcgtagattataaaactggaaaagtagct
cagaaggatttaaacctctctgcctttaatgatttactattgccagaagggaagtttgaa
aaagcttttcaagtattgatgtatgcttatatgcttaacaagaaaaaaccactcgatttc
ccagtaagcgttggtatcatatctttcaaaaatttacagtcgggctatcttccatttcga
tataataaaaatgagcaggtcacagaggatacacttttggagtttgaagtagttttaaaa
tccctcatagcagagatactcaatccagaaattccgtttacacaaagggaggtgtaa
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