Dokdonia sp. Dokd-P16: DCS32_06475
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Entry
DCS32_06475 CDS
T05432
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
dod
Dokdonia sp. Dokd-P16
Brite
KEGG Orthology (KO) [BR:
dod00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
DCS32_06475 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dod03019
]
DCS32_06475 (rnc)
03009 Ribosome biogenesis [BR:
dod03009
]
DCS32_06475 (rnc)
03036 Chromosome and associated proteins [BR:
dod03036
]
DCS32_06475 (rnc)
Enzymes [BR:
dod01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
DCS32_06475 (rnc)
Messenger RNA biogenesis [BR:
dod03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DCS32_06475 (rnc)
Ribosome biogenesis [BR:
dod03009
]
Eukaryotic type
90S particles
RNase
DCS32_06475 (rnc)
Prokaryotic type
rRNA processing factors
DCS32_06475 (rnc)
Chromosome and associated proteins [BR:
dod03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
DCS32_06475 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RPN6_N
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AWH73809
LinkDB
All DBs
Position
1421068..1421805
Genome browser
AA seq
245 aa
AA seq
DB search
MSAFKKIFNSRAEKDGSFFMRMHAIIGFKPKEIRYYEKAFTHRSLGLKKEDGNPLNYERL
EFLGDAMLGSVIAAHLFNAVQGGNEGYLTKMRSKVVSRKHLNELGRDLNLVRYVRASIPL
DNFGVNIHGNLFEALVGAIYLDRGYKYCEKFIAKRVIEPYVDIEKLEGRIISYKSVLIEW
CQKEKRTFKFETFEDTGQDTVKHFGVKLFIDGKVVAKARATSKKKAEEIASKRTFYAFQR
EIETQ
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcatttaaaaaaatatttaactctcgtgctgaaaaggacgggagtttttttatg
cgaatgcatgccatcataggctttaaaccgaaagagataaggtactatgagaaagctttt
acccatcgttctctaggtcttaaaaaagaggatggaaatcctcttaattatgagcgatta
gagtttttaggtgacgcaatgcttgggtctgttatcgcagcacatctctttaatgccgta
caaggtggtaatgaaggatatttaactaaaatgagatctaaggtggtaagccgcaagcac
ctcaatgagctaggcagagacctcaatcttgtgagatatgtgagagcaagtataccatta
gacaactttggggttaatattcacggcaatctttttgaagctttagtaggtgctatatac
cttgatcgaggttataaatattgcgagaagtttatagctaaacgtgtaatagagccctat
gtagatatagagaagcttgagggccgtatcattagttacaagagtgtattaatagaatgg
tgccagaaggaaaagcgcacctttaaatttgaaacttttgaagatactggtcaagacact
gtaaagcattttggagtaaaactttttatagatggtaaggttgtagcaaaggctcgtgct
acaagtaagaaaaaggcagaagaaatagcctccaaacgcaccttctatgcttttcaacga
gaaattgaaactcaataa
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