KEGG   Dokdonia sp. Dokd-P16: DCS32_07250
Entry
DCS32_07250       CDS       T05432                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
dod  Dokdonia sp. Dokd-P16
Pathway
dod03030  DNA replication
dod03430  Mismatch repair
dod03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:dod00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DCS32_07250
   03430 Mismatch repair
    DCS32_07250
   03440 Homologous recombination
    DCS32_07250
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dod03032]
    DCS32_07250
   03400 DNA repair and recombination proteins [BR:dod03400]
    DCS32_07250
Enzymes [BR:dod01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     DCS32_07250
DNA replication proteins [BR:dod03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     DCS32_07250
DNA repair and recombination proteins [BR:dod03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     DCS32_07250
SSDB
Motif
Pfam: RNase_T RNase_H_2 DEDDh_C Rv2179c-like
Other DBs
NCBI-ProteinID: AWH73959
LinkDB
Position
complement(1588635..1589333)
AA seq 232 aa
MGLFTTSPQRDFPKFWTQYLAAFSQEKSKAGFLGSTLDGKKLHTTRFVVFDTETTGLHYK
EDRILSIGAVTVINNEISIAQSLELYLKQDVYKPESAKIHGILRNGSYEQVNEQEAIERC
LEFIGTDILIGHHIGFDVAVINAALKRAQLGKLKNRVLDTETLYKRLVHPINRSLQEKRY
TLDELAEALKIPLHDRHTSAGDALITAIAFIKIVKRLNSDGSLTVKQLFRKN
NT seq 699 nt   +upstreamnt  +downstreamnt
atgggattatttactacatcacctcaaagagattttccaaaattttggacacagtatctt
gctgctttttctcaagagaaaagtaaggcagggtttttaggtagtaccttagatggaaaa
aagctccatactactcgctttgtagtatttgacaccgaaaccactggtttacattataaa
gaagatcgtattctatctataggagcggtcaccgtaattaacaatgagatttctatagca
cagagcctagagctttacctcaaacaagatgtatacaagcctgaaagcgcaaaaatacac
ggcatcttgcgcaatggaagctatgagcaagtaaatgaacaagaggcaatagaaagatgt
ttagagtttataggaacagacattcttatagggcaccacataggttttgacgttgcagta
attaatgcagctctcaaacgtgctcaactaggaaaacttaaaaatagagtgctagataca
gaaacgttgtacaaaagacttgtgcatcctataaacagatcattacaagaaaaaagatac
acgctagatgaacttgccgaagcgctcaaaattcctttgcacgatagacatacctctgcc
ggagatgcgcttatcacagccattgctttcataaaaatcgtaaagcgattaaacagcgat
gggtcacttaccgttaaacaattattcagaaaaaactag

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