Dokdonia sp. Dokd-P16: DCS32_07300
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Entry
DCS32_07300 CDS
T05432
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
dod
Dokdonia sp. Dokd-P16
Pathway
dod03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DCS32_07300 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dod03400
]
DCS32_07300 (xth)
Enzymes [BR:
dod01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
DCS32_07300 (xth)
DNA repair and recombination proteins [BR:
dod03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
DCS32_07300 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
AWH73969
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All DBs
Position
1603922..1604686
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AA seq
254 aa
AA seq
DB search
MKIISYNVNGIRAALRKDFATWLQHTDPDVVLLQETKATPDQVDTAVFESLGYEHYWFSA
QKKGYSGVAILTKKTPKNVVYGTGIESMDFEGRNIRVDFDDVSVMSMYLPSGTNIARLEH
KLEYMSLLQDYVNEIKQDVPNLVIGGDYNICHEAIDIHDPVRNKNVSGFLPVEREWISNF
MDSGFIDSFRHLNKEPDNYTWWSYRANARANNKGWRIDYNMVSEPLKNNIERAVILSDAV
HSDHCPHMVELKLS
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattatctcttataacgtaaacggtatccgtgcagctttgcgcaaagattttgcc
acctggttgcaacacacagatccagatgtggtgctgttgcaagagacaaaagcaacacca
gatcaagtagatacagcagtttttgaaagtctgggttatgagcattactggttcagcgca
caaaaaaaaggatacagtggtgtggctattctcacgaagaaaacacctaaaaatgtagtg
tatggaacgggaatcgaatccatggattttgaaggtagaaatataagagtggactttgat
gatgtttctgtgatgagcatgtacttgccatctggaacaaatattgcccgtctagagcat
aaactggaatacatgtcgttattacaagattatgtaaacgagatcaagcaagatgttcca
aatcttgtgataggtggagattacaatatttgtcacgaagctatagatattcacgatccc
gtacgtaataaaaacgtaagcggatttttacctgtagagcgtgagtggataagtaacttt
atggacagtggttttatagactctttccgtcatcttaacaaagagccagacaactacaca
tggtggagttatcgagcaaatgcgcgagcaaataacaaaggatggcgcattgattataac
atggtaagtgagcctcttaaaaataatattgaacgtgctgtgattctctctgatgctgtg
catagtgatcactgtccgcacatggtagaattaaaattatcttaa
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