Dokdonia sp. Dokd-P16: DCS32_09525
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Entry
DCS32_09525 CDS
T05432
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
dod
Dokdonia sp. Dokd-P16
Pathway
dod03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dod00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DCS32_09525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dod03019
]
DCS32_09525
03016 Transfer RNA biogenesis [BR:
dod03016
]
DCS32_09525
Enzymes [BR:
dod01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
DCS32_09525
Messenger RNA biogenesis [BR:
dod03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DCS32_09525
Transfer RNA biogenesis [BR:
dod03016
]
Prokaryotic type
tRNA degradation factors
DCS32_09525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
KH_1
PNPase
S1
KH-I_KHDC4-BBP
S1_2
Motif
Other DBs
NCBI-ProteinID:
AWH74388
UniProt:
A0A2S1QCT3
LinkDB
All DBs
Position
complement(2121009..2123210)
Genome browser
AA seq
733 aa
AA seq
DB search
MIPKVYKEVIDLGDGREISIETGKLAKQAHGSVVVQSGKCMLLCTVVSNYEQKDLDFLPL
TVDYREKFAAAGRYPGGFFKREARPSDGEVLTMRLVDRVLRPLFPKDYHSETQVMIQLMS
HDDDVMPDAMAGLAASAAIQLSDFPFECAISEARVGRVNGEFIINPTRAQLEESDIDMMI
GASADSVMMVEGEMDEISEEEMADAIKFAHDHIKVQCAAQLRLAEAFGKKEVREYPAERE
DADLKQKVHDMAYDKVYAIAQAGSAKHERSAAFKEIKEEIKATFSEEELEDFGGLVSKYY
RAAEKAAIRDLTLNEGLRLDGRKTTEIRPIWSEIDYLPSVHGSAIFTRGETQALATVTLG
TSRDANKIDMPSHEGEENFYLHYNFPPFCTGEARPIRGTSRREVGHGNLAQRGLKGMIPA
DCPYTVRVVSEVLESNGSSSMATVCAGTMAMMDAGIQMTKPVSGIAMGLISDGASGKYAV
LSDILGDEDHLGDMDFKVTGTADGITACQMDIKVKGLSYEILVAALQQARDGRLHILDKI
VETIATPREDVKDYAPKMVGVRIPNEFIGALIGPGGKVIQELQKATGTTIVINEDPVTEE
GIVEILGTGQEGINAVLAKIDSITFKPVVGNTYKVKVIKMLDFGAVVEYLDAPGNEVLLH
VSELAWERTENASDVVSMGDELDVKYFGIDKRTRKEKVSRKALLEKPEGYVAPAPRERNN
DRRPPRRDDRKRD
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgattccaaaggtttacaaagaggtcatcgaccttggtgatggaagagaaatctctatc
gaaacaggaaaacttgcaaagcaagcacacggatctgtagtagtacagtctggaaagtgt
atgttgctttgtactgtagtatcaaactacgaacaaaaagatcttgacttcttaccactt
acggtagattaccgtgagaagtttgcagcagcaggtcgttacccaggtggtttctttaaa
agagaagctcgtccatctgacggtgaagtattaacaatgcgtcttgtggatcgtgtacta
cgtccattattcccaaaagattaccactctgaaactcaggtgatgatccagttaatgtct
catgatgacgacgttatgccagatgcaatggcaggtcttgcagcaagtgctgcaatccaa
ttatctgacttcccatttgagtgtgctatctctgaggctagagtaggacgtgtaaacggt
gagtttatcatcaaccctacaagagctcagctagaagagtctgacatcgatatgatgatt
ggagcttcggcagattctgtgatgatggtagaaggtgagatggatgaaatttctgaagaa
gaaatggcagacgcaattaaatttgctcacgatcacattaaagtacagtgtgctgcacag
cttcgtcttgcagaagcttttggcaaaaaagaagtacgtgagtacccagccgaaagagaa
gatgcagaccttaagcaaaaggtacacgacatggcgtatgataaggtatatgcaatcgca
caagccggatctgcaaagcatgagcgtagcgctgcttttaaagaaattaaagaagaaatc
aaagcaactttttctgaggaagaacttgaagactttggtggacttgtatctaagtattac
cgtgctgccgaaaaggctgctatacgtgatcttacacttaacgaaggacttcgtcttgat
ggtcgtaagactacagagatacgccctatctggagtgagatagattacttaccatctgta
cacggatctgcaatcttcacacgtggagaaactcaggcactagctacagtaacactaggt
acgtctagagatgcaaacaaaatagatatgccatcacacgaaggagaagaaaacttctac
cttcactataacttccctcctttctgtacaggtgaggcaagacctatacgtggtacttca
cgtcgtgaggtaggtcacggtaaccttgctcaacgtggtcttaaaggaatgatcccagca
gattgtccttatactgtacgtgtagtgtctgaggtgttagaatcaaacggttcttcatct
atggcaactgtttgtgcaggtactatggcaatgatggatgcaggtatccagatgacgaag
ccagtttctggtatcgcaatgggacttatatctgacggtgcttctggaaagtatgcagta
ctttctgatatccttggagatgaagatcacttaggagatatggactttaaagtaacaggt
acggcagacggtattacagcttgccagatggacattaaagtaaaaggattatcatacgag
attcttgtagctgccttacaacaagctagagatggtcgtttacacatactcgataagatt
gtagagactattgcaactccacgtgaggatgtaaaagactacgctccaaaaatggtaggt
gtacgtatccctaatgaattcattggtgcgttaataggcccaggaggaaaagtaatacaa
gagcttcaaaaagcaactggaactaccatcgttataaacgaagatccagtaacagaagaa
ggtattgtagaaatcttaggaacaggtcaagaaggtatcaacgccgtacttgcaaagata
gactctattacatttaagccagtcgtaggtaatacgtacaaggtgaaggtaatcaagatg
ctagattttggtgcagtagtagaatatcttgacgctccaggtaacgaagtattactacac
gtatctgagcttgcttgggaacgtacagaaaatgcgtctgacgtagtttctatgggtgac
gagcttgacgtaaaatacttcggtatagacaagcgtactcgtaaggaaaaagtttctcgt
aaagcattgcttgagaagccagaaggttatgttgctccagctcctagagagcgcaataat
gaccgtcgtccacctagaagagacgatcgtaagagagattaa
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