Dokdonia sp. Dokd-P16: DCS32_10020
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Entry
DCS32_10020 CDS
T05432
Name
(GenBank) exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
dod
Dokdonia sp. Dokd-P16
Pathway
dod03030
DNA replication
dod03430
Mismatch repair
dod03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DCS32_10020
03430 Mismatch repair
DCS32_10020
03440 Homologous recombination
DCS32_10020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dod03032
]
DCS32_10020
03400 DNA repair and recombination proteins [BR:
dod03400
]
DCS32_10020
Enzymes [BR:
dod01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DCS32_10020
DNA replication proteins [BR:
dod03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DCS32_10020
DNA repair and recombination proteins [BR:
dod03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DCS32_10020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
GIY_YIG_2
RNase_H_2
DEDDh_C
DUF7508
AMG1_III
Motif
Other DBs
NCBI-ProteinID:
AWH74481
UniProt:
A0A2S1QD32
LinkDB
All DBs
Position
complement(2227152..2228528)
Genome browser
AA seq
458 aa
AA seq
DB search
MYAILDIETTGGKYNEEGITEIAIYKFDGHQVVDQFITLVNPERPIQAFVVGLTGINNGM
LTDAPKFHEIAKRIIEITEGCIIVAHNAQFDYRILSLEFDRLGYPFERTTLCSVELSQEL
LPGHDSYSLGKLTKALGIAMSNRHRADGDAIATVKLFKLLLEKDPEKTIITKAIRSFPKK
HMDTKLKDLIRSVPSETGVYFMHNVNGTIIYIGKSKNMKKRLTQHFTNDNRKSKQIQDQV
ETVTYQTTGTELIALLKENEEIKRHKPKFNRALRRTKFKVQLTHYTDSEGYIHLKTERAD
GRKESITTYSNSMSAKANLERIIDSYDLCQNMTMYNEKSGNCFNYTIKKCNGACIGEESP
ESYNQRVQAFLDKHSYKNKSMVIVERGRSSIERSVVLVEDGVFVGIGYYKPDFQLNDLET
LKSIITPMEDNRDARHIIQSYCRSRKRLKIIPLDQITN
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atttacgcaatactagacatagaaaccactggcggcaagtacaacgaagaaggtattaca
gaaatcgccatttataaatttgacggacatcaagttgtagatcaatttattaccctcgta
aacccagaacgccccatacaagcatttgtagtaggacttactggcattaataacgggatg
ttaacagatgctccaaagtttcatgaaatagcaaagcgtattattgaaattacagaggga
tgtataattgtggctcataatgcccagtttgactatcgtattttaagtctagaatttgac
aggcttggatacccttttgaaagaaccaccttatgttctgtagagctttctcaagaattg
ctaccaggacatgatagctatagtttaggaaaactaacgaaggcattaggaatcgcgatg
tctaacagacatagagcagatggtgatgctattgcaactgtcaaacttttcaagttactc
ctagagaaagacccagaaaagacaattataactaaagccattcgctctttcccaaaaaag
catatggacaccaaacttaaggaccttataagaagtgtaccttctgagactggtgtgtac
tttatgcataatgtaaatggaaccatcatttacataggcaaaagtaaaaacatgaaaaaa
cgtcttacgcaacattttactaatgataatcgtaagagtaagcaaatacaagatcaggta
gaaacggttacctaccagactacaggcactgagctcattgcacttctaaaggaaaatgaa
gaaataaaacgtcacaagccaaagtttaatagagccttacgtagaactaaatttaaggta
caactcactcactatacagacagtgaaggttatatacacctcaagaccgaaagagcagat
ggtcgcaaagagtctattacaacttatagcaactctatgagtgcaaaggctaatctagag
cgcattatcgactcttatgatttatgccagaatatgacgatgtacaatgaaaagagcggc
aactgctttaattatactattaaaaaatgtaatggcgcttgtataggagaggaatcacca
gaatcatataaccagcgtgtacaagcttttctagacaagcatagctataaaaacaaaagt
atggtaatcgtggagcgcggtcgcagctcaattgaacgctctgtagtacttgtagaagat
ggtgtttttgtagggataggttattataaacctgatttccaactcaacgatcttgaaacg
cttaaatctattataacccctatggaagataatagagatgctagacatattatccagagt
tattgtcgtagcagaaaacgacttaagattattccgctagatcagattactaactag
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