Dokdonia sp. Dokd-P16: DCS32_11970
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Entry
DCS32_11970 CDS
T05432
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
dod
Dokdonia sp. Dokd-P16
Pathway
dod03030
DNA replication
dod03430
Mismatch repair
dod03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DCS32_11970 (holA)
03430 Mismatch repair
DCS32_11970 (holA)
03440 Homologous recombination
DCS32_11970 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dod03032
]
DCS32_11970 (holA)
03400 DNA repair and recombination proteins [BR:
dod03400
]
DCS32_11970 (holA)
Enzymes [BR:
dod01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DCS32_11970 (holA)
DNA replication proteins [BR:
dod03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DCS32_11970 (holA)
DNA repair and recombination proteins [BR:
dod03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DCS32_11970 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
AWH74850
UniProt:
A0A2S1QEJ7
LinkDB
All DBs
Position
2678306..2679310
Genome browser
AA seq
334 aa
AA seq
DB search
MKHAKNIVEDIKKGIIKPIYFLSGEEPYFIDQISDYIEHNLLDEAEKGFNQVVLYGRDVT
IEDIVGNAKRYPMMAERQVVIVKEAQDLSRQIEKLADYVKNPQPTTVLVVAYKYKKLDKR
KGLAKALKEYGVHYESKKLYENQVGDWLRRVLIDEGYHIQPKAAQILVDYLGNDLGKVVN
ELNKLMLILPKGSEITPQAIEENIGISKDFNIFELRKAISEKDIVKAQRIAQYFTQNPKD
NPLVLTVSQLFSLFASILKYHGLPQKDKTTVARALGVSPFFVGEYITAGRNYPMKKVSAC
ISLIREVDVKSKGVGASAFASNDLLKELLVKIMN
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcacgcaaaaaacatagttgaagacattaaaaaaggaatcataaaacctatttac
tttttaagtggggaagagccttattttatagatcaaatctcagattatatagagcacaat
ctactcgatgaagccgagaaaggttttaatcaagtggtgctttatggtcgtgatgttacc
atagaagatattgtaggtaatgctaagcgctaccctatgatggcagagcgccaggtggta
attgtaaaggaagcgcaagatctctcgcgccagattgagaagctagcagattatgtgaaa
aacccacaacctacaacggtacttgtggtggcttataagtataagaagttagataaacgc
aaaggactcgcaaaagccctaaaggaatacggagttcactatgaaagtaagaaactctat
gaaaaccaagtaggcgactggttacgtcgtgttcttatagatgagggctatcatatccaa
cctaaagcagcgcaaattctagtagattacctaggtaatgatttaggtaaagtagttaat
gaactcaataagttgatgcttattcttcctaaaggaagcgagattacaccacaagctata
gaagagaatatcgggatcagtaaggactttaatatctttgagctacgcaaagcaatctca
gagaaggatattgtaaaagcacagcgcattgcacagtattttacacagaaccctaaggat
aacccgctagtgttgacggtgagccagctgtttagtttatttgcgagtattctcaaatat
cacgggcttcctcaaaaggataagactacggtggctagagcactcggggtttctccattt
tttgtgggagaatatattactgcaggtcgcaattatcctatgaaaaaagtaagtgcatgt
atctccttaataagagaagtagatgtaaagagtaaaggagtaggagcaagtgcctttgca
agtaacgacttactaaaagagctgcttgtaaaaatcatgaattaa
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