KEGG   Dokdonia sp. Dokd-P16: DCS32_12455
Entry
DCS32_12455       CDS       T05432                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
dod  Dokdonia sp. Dokd-P16
Pathway
dod00010  Glycolysis / Gluconeogenesis
dod00020  Citrate cycle (TCA cycle)
dod00260  Glycine, serine and threonine metabolism
dod00280  Valine, leucine and isoleucine degradation
dod00310  Lysine degradation
dod00380  Tryptophan metabolism
dod00620  Pyruvate metabolism
dod00630  Glyoxylate and dicarboxylate metabolism
dod00640  Propanoate metabolism
dod00670  One carbon pool by folate
dod00785  Lipoic acid metabolism
dod01100  Metabolic pathways
dod01110  Biosynthesis of secondary metabolites
dod01120  Microbial metabolism in diverse environments
dod01200  Carbon metabolism
dod01210  2-Oxocarboxylic acid metabolism
dod01240  Biosynthesis of cofactors
Module
dod_M00009  Citrate cycle (TCA cycle, Krebs cycle)
dod_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
dod_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
dod_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:dod00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    DCS32_12455 (lpdA)
   00020 Citrate cycle (TCA cycle)
    DCS32_12455 (lpdA)
   00620 Pyruvate metabolism
    DCS32_12455 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    DCS32_12455 (lpdA)
   00640 Propanoate metabolism
    DCS32_12455 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    DCS32_12455 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    DCS32_12455 (lpdA)
   00310 Lysine degradation
    DCS32_12455 (lpdA)
   00380 Tryptophan metabolism
    DCS32_12455 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    DCS32_12455 (lpdA)
   00670 One carbon pool by folate
    DCS32_12455 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dod04147]
    DCS32_12455 (lpdA)
Enzymes [BR:dod01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     DCS32_12455 (lpdA)
Exosome [BR:dod04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   DCS32_12455 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_oxidored FAD_binding_2 GIDA HI0933_like NAD_binding_8 FAD_binding_3 AlaDh_PNT_C Lys_Orn_oxgnase DAO Thi4 3HCDH_N Mqo Amino_oxidase UBA_9 Myosin_N MSSS
Other DBs
NCBI-ProteinID: AWH74944
UniProt: A0A2S1QED3
LinkDB
Position
2787608..2789005
AA seq 465 aa
MSSYDVAVIGSGPGGYVAAIRCAQLGMKTAIIEKYSTLGGTCLNVGCIPSKALLDSSHHY
EDAIKHFEEHGIEVGDVKFNLEKMISRKQGVVDTTTKGIEFLMGKNNIDVYQGVGSFKDA
THINIAGEKNETIEAKNTIIATGSKPSTLPFITLDKERIITSTEALKLPEVPKHLVVIGG
GVIGLELGQVYKRLGAEVTVVEYMDRIIPTMDGAQSKELLKVFKKQKMKFALSHGVTAVE
RNGDEVTVKATDKKGQEVEFKADYVLVAVGRRAYTDGLNLDAVGIKTDERGKVEVNEHLQ
TNVSNIYAIGDVIKGAMLAHKAEEEGTLVAEIMAGQKPHIDYNLIPGVVYTWPEVASVGK
TEEQLKEAGVAYKSGQFPMRALGRSRASGDTDGFVKILADKETDEVLGVHMVGARVADLI
AEGVTAMEFRASAEDIARMSHAHPTYAEAVKEAALAATEDRPIHI
NT seq 1398 nt   +upstreamnt  +downstreamnt
atgagttcatacgatgtagccgttataggctctggtcctggaggatatgttgcagcaata
cgctgtgcacaactaggaatgaaaactgcaattatagagaaatatagtacactaggagga
acatgtcttaacgtagggtgtatcccttctaaggcgcttctagactcatcacaccactat
gaagatgctatcaagcactttgaagagcacggtatcgaagtaggtgatgtaaaatttaac
ctagagaaaatgatttctcgcaagcaaggagttgtagatactactacaaagggtatcgag
ttcttgatgggtaaaaataacatagacgtttatcaaggtgtaggttcttttaaagatgct
acacacatcaatatcgctggtgaaaagaacgaaactattgaggcaaaaaacaccattatt
gccacaggttctaagcctagtacattaccttttatcacgctagataaagaacgtatcatt
acttctacagaggcgttaaaacttccagaagtacctaaacatctagttgtaataggtgga
ggagtaataggtcttgagcttggtcaagtatataagcgtctaggcgcagaagtaacagta
gtcgagtatatggatcgcattatcccaactatggatggcgcgcaaagtaaagaactactt
aaagtcttcaagaagcaaaaaatgaaatttgcactttctcacggtgttactgctgtggag
agaaatggagatgaagtaactgtaaaagccacagataagaaaggacaagaagttgagttt
aaggcagattacgtgcttgtagccgtaggtcgtcgtgcttatacagatggtcttaatctt
gatgctgtaggtataaagacagatgagagaggaaaagttgaggtaaacgagcacttgcag
actaatgtgtcaaacatttatgcaataggtgacgtgattaaaggagcaatgcttgctcac
aaagcagaggaagaaggaacactcgttgccgaaatcatggcaggtcaaaaacctcacatt
gattataacttaattccaggtgttgtatacacatggccagaagttgcctctgtaggtaaa
actgaggagcaacttaaagaagctggtgtagcctacaagtctgggcagttccctatgcgt
gcactaggacgtagccgcgcaagtggtgataccgatggatttgtaaaaatccttgcagac
aaggaaacagatgaagtactaggagtacacatggtaggagctcgtgtagcagacttaatt
gctgaaggtgtaaccgcaatggaattccgtgcaagtgcagaagatattgcacgcatgagc
cacgcacaccctacgtatgcagaagctgtaaaggaagcagcactagccgcaaccgaagat
cgcccgatacatatctaa

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