Dokdonia sp. Dokd-P16: DCS32_13200
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Entry
DCS32_13200 CDS
T05432
Name
(GenBank) pyruvate carboxylase
KO
K01958
pyruvate carboxylase [EC:
6.4.1.1
]
Organism
dod
Dokdonia sp. Dokd-P16
Pathway
dod00020
Citrate cycle (TCA cycle)
dod00620
Pyruvate metabolism
dod00720
Other carbon fixation pathways
dod01100
Metabolic pathways
dod01120
Microbial metabolism in diverse environments
dod01200
Carbon metabolism
dod01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
dod00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
DCS32_13200
00620 Pyruvate metabolism
DCS32_13200
09102 Energy metabolism
00720 Other carbon fixation pathways
DCS32_13200
Enzymes [BR:
dod01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.1 pyruvate carboxylase
DCS32_13200
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Paralog
GFIT
Motif
Pfam:
PYC_OADA
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
HMGL-like
Dala_Dala_lig_C
BSH_RND
BSH_YknX
ATP-grasp_3
ATP-grasp_4
RimK
BSH_YhbJ
ATPgrasp_ST
TNP-like_GBD
DUF2242
ATPgrasp_Ter
Motif
Other DBs
NCBI-ProteinID:
AWH75084
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Position
complement(2959133..2962585)
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AA seq
1150 aa
AA seq
DB search
MKIKKVLVANRGEIAIRVLRACTELNIATVAIYTYEDRYSQHRNKADESYQIGKNNEPLK
PYLDMDQIIDLAKSKHVDAIHPGYGFLSENSTFARKCAENGIIFIGPEPEVMDALGDKIT
AKKVAQKCGVPIIESNKIALYTLDIALSEATKIGYPVMLKAASGGGGRGMRIIRKIEDLQ
LSFDSARNEALNSFGDDTMFLEKYVEDPKHIEVQIVADSHGNIRHLYERDCSVQRRHQKV
VEMAPSFGLSQTLRDNLYKYAVAIATEVNYNNIGTVEFLVDADDNIYFIEVNPRIQVEHT
VTEMVTGIDLVKTQIFVAGGYNLSDKQIKIYGQESIGTYGFAIQCRLTTEDPVNNFTPDY
GKITTYRSASGMGIRLDAGSIYQGYKVSPFFDSMLVKVSAHGRTLDGSIRKMVRALKEFR
IRGVETNIHFLQNVIQTDTFKNGKTTVNFIQNTPSLFDIKLSQDRTSKVVQFLAEVSVNG
NSDVKKKDDSKIFRTPETPLYSLSDPFPKGTKDLLTELGPEEFCKWLMAEKKIHFTDTTM
RDAHQSLLATRMRSYDMLKVASSFAKNHPNTFSMEVWGGATFDVCLRFLHESPWTRLREL
RKAVPNILFQMLLRGSNGVGYKAYPDNLIEKFVEKSWENGVDIFRIFDSLNWVKAMEPSI
QYVRNLTGGIAEGAISYTGDILDVKQTKYDLKYYTQLAKDLENAGAHMIAIKDMAGLLKP
YAATELVTALKDTVNLPIHLHTHDTSSLQTATYLKAIEANVDVVDVALGGLSGLTSQPNF
NAVVEMMKYQEREHPFEMDKLNQFSNFWEDTRELYYPFESGLKAGTAEVFQHEIPGGQYS
NLRPQATALGLGDRFAEVKKMYAAVNSMFGNLVKVTPSSKVVGDMAIFMVTNNLTPEDVM
ERGDTISFPESVINFFKGDLGQPVGGFPKKLQAIILKNKEAYTDRPNAHLAPVDFDEEYT
AFTTKFQKGFTRPLEMEDFLSYMLYPKVFEQAHENYKKYGNLALVPTKNFFYGMALGEEI
LIELEPGKTVIIKLLSIGIPSDEGMRTVFFKVNGENRFVEVHDTSLNIKKVENLKVDPED
SNQIGAPLQGSLYKVLVKKGQEVKENDPLFIIEAMKMETTVVASTNGRVASITVSDGNMV
SQNDLVLTIE
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattaaaaaagtccttgtcgccaatcgcggggaaattgctattagagtactacgt
gcctgtacagaacttaacatcgctacggttgcgatatacacctacgaagacagatactca
caacatcgcaataaagcagatgagtcttaccaaataggcaagaataatgagccactcaag
ccctaccttgatatggatcagattattgacctagccaaatctaaacatgtagatgccatt
caccccggatacggtttcttatctgaaaactccacctttgcaagaaaatgtgccgaaaac
ggtatcatctttataggtcccgaacctgaagtgatggatgccttaggtgataaaatcact
gcaaaaaaagttgctcaaaagtgtggtgttcctattatagaaagtaataaaattgcactt
tacacgcttgacatcgctcttagtgaagctacaaaaataggctatcctgtgatgcttaaa
gctgcctcaggtggtggtggtcgagggatgcgtatcattcgtaagatagaagatttacag
cttagctttgactcggctcgtaatgaggcgctaaactcatttggggatgataccatgttt
ctagagaaatatgtagaagatcctaagcatatagaagtacagattgtagcagattctcac
ggtaacatcaggcacttgtatgagcgtgattgctctgtacagcgtagacaccagaaagtg
gtagagatggctccttcttttgggttatcacaaacactacgtgataatctatataaatat
gccgttgccatcgctaccgaagtaaactataacaatattggtactgttgagtttcttgtg
gatgcagatgataatatttacttcattgaggtaaatccgcgtattcaagtggagcatacg
gttactgagatggtaacgggtattgatcttgtaaaaacacagatttttgtcgctggaggt
tataatctttcagataagcagattaaaatttacggtcaggaatctattggaacttatggt
tttgcgatacaatgccgacttacaactgaagatcctgtaaataactttacgccagattat
ggtaagattaccacctaccgcagtgcatctggaatgggaatccgtcttgatgcaggaagt
atttatcaagggtataaagtaagtccattttttgactctatgcttgtcaaagtttctgca
catggtagaacgcttgatggctctattcgtaagatggtcagagccttaaaagagtttaga
atacgtggtgtagaaacgaacattcactttctgcaaaatgtcatccagacagatactttt
aagaatggaaaaactaccgtaaactttatacagaacactccttccctatttgacatcaag
ctatcacaagacagaacttcaaaagtagttcagtttcttgcagaggtaagtgtcaatgga
aattctgacgtaaagaaaaaggatgactctaagatatttagaacaccagaaaccccatta
tacagcctctcagaccctttcccgaaagggaccaaagacttactcacagagttaggtcca
gaggaattctgtaaatggctcatggcagaaaaaaagatacattttacagatacaaccatg
cgtgatgcacaccagtccctactggctacacgcatgcgctcgtatgatatgctcaaagta
gcatctagttttgcaaaaaatcaccctaacacctttagtatggaagtttggggaggtgca
acctttgatgtttgcttgcgtttcttacacgaaagcccatggacaagactgcgcgaactg
cgtaaagcggtgcctaatattcttttccagatgctcttgagaggatcaaacggtgtagga
tacaaggcgtatccagataacttgatagagaaatttgtcgaaaaatcttgggagaatggt
gtagatatttttagaatttttgattcgcttaactgggtaaaagccatggaacctagcatc
cagtacgtgcgtaacctcacaggaggaattgccgaaggtgcgataagctacactggagat
attcttgatgtaaagcaaactaagtatgatcttaagtattatacccaactagcaaaagat
cttgaaaacgcaggagcacatatgattgccataaaagatatggcaggactcttgaaacca
tatgccgctacagaactggtaacagcgcttaaagacaccgtaaacttaccgatacattta
catacgcatgatacgtcatcactacagacggctacctatctcaaggccattgaggcaaat
gtagacgtagtagatgtagccctgggcggactatcaggactcacctctcaacctaacttt
aatgcggtggtagagatgatgaaatatcaagagcgtgagcatccttttgagatggacaaa
ctcaatcagttttcaaatttctgggaagacacccgcgagctctactacccttttgagtct
ggactcaaggcaggaacggcagaggttttccagcatgagattcctggagggcaatattct
aacctgagaccacaagcaactgctttaggtcttggtgatcgctttgccgaagtaaaaaag
atgtatgctgctgtaaatagtatgtttggaaacctagttaaagtaacacctagctcaaaa
gtagtgggtgatatggcaatatttatggtgactaataaccttacgccagaagatgtgatg
gaacgtggcgacacgatttccttcccagaatctgtgattaatttctttaaaggcgattta
ggtcagccagtaggtggtttccctaaaaagttacaagctatcatcttaaagaataaagaa
gcgtatacagaccgtcctaatgcgcatcttgctccagtagattttgatgaagaatacaca
gcgtttacaaccaagtttcaaaaaggatttacacgtcctctagagatggaagacttctta
tcatatatgctctaccctaaggtgtttgagcaagcgcatgagaattataagaagtatggc
aacctagccctcgtacctactaagaatttcttttacggtatggcgttaggagaagagatt
ctcattgagctagaacctggtaaaacagtcatcatcaagttactttctattgggatacct
agtgatgaaggaatgcgtaccgtgttttttaaagtaaatggtgagaaccgctttgtcgaa
gtacacgacacctcactcaacattaagaaagtagaaaatcttaaagtagacccagaagac
agcaaccagataggcgctcccctacaaggatccctctacaaggtacttgtcaaaaaaggt
caagaggtaaaggagaacgacccactctttatcatagaagccatgaaaatggaaaccacc
gtagtcgcctcaacaaacggccgcgtagcatccattaccgtaagcgacggcaatatggtc
tcacaaaatgacctcgttcttaccattgaatag
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