Dokdonia sp. Dokd-P16: DCS32_13410
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Entry
DCS32_13410 CDS
T05432
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
dod
Dokdonia sp. Dokd-P16
Pathway
dod00521
Streptomycin biosynthesis
dod00523
Polyketide sugar unit biosynthesis
dod00525
Acarbose and validamycin biosynthesis
dod00541
Biosynthesis of various nucleotide sugars
dod01100
Metabolic pathways
dod01110
Biosynthesis of secondary metabolites
dod01250
Biosynthesis of nucleotide sugars
Module
dod_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
dod00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
DCS32_13410 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
DCS32_13410 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
DCS32_13410 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
DCS32_13410 (rfbB)
00525 Acarbose and validamycin biosynthesis
DCS32_13410 (rfbB)
Enzymes [BR:
dod01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
DCS32_13410 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
RmlD_sub_bind
NmrA
Methyltransf_31
Motif
Other DBs
NCBI-ProteinID:
AWH75123
UniProt:
A0A2S1QF11
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All DBs
Position
3009071..3010117
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AA seq
348 aa
AA seq
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MMNILITGGAGFIGSHVVRLFLEVFPKSHIYNVDALTYAGNLENLSDVDTSSNYTFIKGD
INDAPFLMNLFSKYEFDKVIHLAAESHVDRSIEDPLAFVQTNVIGTLNLLNAAKSIWKED
YSSKLFYHISTDEVYGSLGESGLFTETTSYDPNSPYAASKASSDHFVRAFGETYGLPYII
SNCSNNYGPNQFPEKLIPLFINNIIEGTSLPVYGDGNYTRDWLFVKDHAAAIALIFEKGT
LKETYNIGGFNEWKNIDLVKLLCDIMDNKLSRKRDSSKSLITYVKDRPGHDKRYAIDASK
IEKELGWKPSVTFEEGLELTVNWYLENNQWLKNVTSGNYQEYYNKMYS
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
ataatgaatattcttattacaggtggagcaggttttatagggtctcatgtggtgagatta
tttttagaagtttttcccaaaagtcatatttacaatgttgatgcgctcacatatgcaggt
aacctagagaacctttccgatgtagatacgtctagcaattatacatttataaaaggggac
atcaatgatgccccttttttgatgaatctattttcaaagtacgaatttgataaggtaatc
catctagctgcggagtctcatgttgatagaagtattgaggatcctttagcgtttgtgcag
actaatgttattggaacacttaatcttcttaacgcggcaaagagtatttggaaagaagat
tattcgtcaaaacttttctaccatataagtacagatgaagtctatggttcactaggtgaa
agcggactcttcactgaaactacttcttacgatccaaactcgccctatgcagcgtctaag
gcgagctcagatcactttgtgagagcgtttggagagacgtacggtttaccatatataatt
agtaattgctctaataattatgggcctaatcagtttccagaaaaattaattcctttattt
ataaataatattatcgagggtacatctttacctgtttatggtgatgggaattacacgaga
gattggttatttgtaaaagaccatgcggctgcaatagcacttatatttgaaaaaggtaca
ttaaaagaaacctataacatcggcggttttaatgagtggaaaaatattgacttagtaaag
ctattgtgtgatataatggataataagctttcgcgaaagcgggattcttcaaaatcactt
ataacttacgtgaaagaccgtccgggtcacgataaacgctacgcaatagatgcctcaaaa
atagaaaaagaacttggttggaaaccatctgttacttttgaggaaggtttagaacttact
gtaaattggtatcttgaaaataatcagtggctcaagaatgtgacttctggtaattaccaa
gaatactataataaaatgtattcataa
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