Denitratisoma oestradiolicum: DENOEST_0283
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Entry
DENOEST_0283 CDS
T06737
Name
(GenBank) Ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
doe
Denitratisoma oestradiolicum
Brite
KEGG Orthology (KO) [BR:
doe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
doe03016
]
DENOEST_0283
Enzymes [BR:
doe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
DENOEST_0283
Transfer RNA biogenesis [BR:
doe03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
DENOEST_0283
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Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
CAB1367455
UniProt:
A0A6S6XRV3
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All DBs
Position
I:248937..250949
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AA seq
670 aa
AA seq
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MNILFEEEGSFKAGSVLADNTTSLQVELPTGKRSKVKAANVLLRFVAPSAAELLTQAESE
AGSIDTDFLWEACPEGEFGFEDMATDYYGQKPTAVEAATLLLALHAAPMYFHRKGKGRFR
KAPPEILQAAKAGLEKKRLQAEAQERMAGELKAGRLPAEFPPLLREMLYKPDRNRIETKA
LEAACAETGLSVPRLLEKCGAITDTHEYHLGRFLFEFFPKGTGFPAPWDNNEAPPPILPR
QAGEVTDHPPSPGRGDGGEGPPFDDGEWRGLPLAEVHAFSIDDAHTTEIDDAFSVVFQPD
GGMRVGIHIAAPGLGISPESDLGKIARERLSTVYMPGRKITMLPEPVVERFTLSAGSHAP
ALSLYLEVAPDLRVLGHESRIERVPVVANLRHHDIEPLFNEQTLQSGLGEFAFRDELKRL
WELATVLEAGRGKAGKQNNRKDYNFHVDWERTSPQGPGWIEIEERPRGSPLDTLVAELMI
VANSTWGGLLAQAKVGALYRGQTSGKVRMTTVPTPHEGLGVDCYAWTTSPLRRYTDLLNQ
WQLIALLGQETPPFPAKSAELLAAMRDFDITYAAYADFQRGMERYWCLRWLLQQERDNLS
AQVIRENLVRCDELPLVLRVPSLPACNPGQKVALALEGIDLLDAELRPRFTELLDSATVD
GALGEEEGGE
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcctgtttgaagaagaaggcagtttcaaggccggcagtgtgctggccgacaac
accacctccctgcaggtggaactacccacgggcaagcgctccaaggtcaaggcggccaat
gtactgttgcgctttgtcgccccctctgccgccgagctgctgacccaggccgagagcgag
gctgggtccattgataccgatttcctctgggaagcctgccccgagggggagttcggcttc
gaggacatggcgaccgactactacggccagaagcccactgccgtggaagccgccaccctg
ctgctggccctccatgccgcgcccatgtatttccatcgcaagggcaagggacgcttccgc
aaggcgccgccggagatactccaggccgccaaggccggcctggaaaagaagcgcctccag
gccgaggcccaggaacgcatggccggggaactcaaggcgggtcgcctgcccgccgaattc
ccgcccctgctgcgggagatgctctacaagccggaccgcaaccgcattgagaccaaggcc
ctggaggctgcctgtgccgagaccggcctgtcggtgccccggctgctggaaaagtgcggc
gccatcaccgatacccacgaatatcacctgggaagattcctgttcgagttctttcccaag
ggaaccgggttcccggctccttgggacaataacgaggccccccctcccatcctcccccgc
caagcgggggaggtgactgatcaccccccttccccgggaaggggggatgggggggaaggc
ccaccctttgacgatggagaatggcgtggacttccgcttgcggaagtccacgccttctcc
atcgacgatgcccacaccacggaaatcgacgatgccttttccgttgtcttccaacctgac
gggggcatgcgggtaggcatccacatcgccgcgccaggcctgggcatcagcccggagtcc
gatctgggaaagatcgcccgggagcgactgtccacggtctatatgcccggccgcaagatc
accatgctgcccgagcccgtggtggagcgcttcaccctttccgcaggcagccatgcgccg
gccctgtccctctatctggaggtggcgccggacctgcgggtgctgggccacgaaagccgt
atcgaacgggtgccggtggtggccaatctgcgccaccacgacatcgagcccctgttcaac
gagcagactctccagtccggcctgggggagtttgccttccgcgacgagctgaagcgtctc
tgggaactggccacggtgctggaggcgggccggggcaaggccggcaagcagaacaaccgc
aaggattacaacttccatgtggactgggagcggacttcgccccaggggccgggctggatc
gagatcgaggagcggccgagaggaagccccctggataccctggtggcggaattgatgatc
gtcgccaattccacctggggcggtctgctggcccaggccaaggtgggtgccctgtatcgg
ggtcagaccagcggcaaggtgcggatgaccaccgtgcccacgccgcacgagggtctgggg
gtggattgctacgcctggaccacctcgcccctgcgccgctatacggacctgttgaaccag
tggcagttgatcgccctgctggggcaggagacgcctcctttcccggccaagtcggcggaa
ctgctggcggcgatgcgggacttcgatatcacctatgctgcctacgccgactttcagcgg
ggcatggagcgttactggtgcctgcgctggctgttgcagcaggagcgggacaacctgagt
gcgcaagtgatccgggaaaatctggtgcgctgcgacgagctgcccctggtgctgcgggtg
ccttcgctgcctgcctgtaatccggggcagaaggtggccctggctctggaagggatcgat
ttgctggacgccgagctacggccccgattcacggaattgctggactccgcgacggttgat
ggggctttgggggaagaggagggtggcgagtaa
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