Denitratisoma oestradiolicum: DENOEST_0569
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Entry
DENOEST_0569 CDS
T06737
Symbol
mrdA
Name
(GenBank) transpeptidase involved in peptidoglycan synthesis (penicillin-binding protein 2)
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
doe
Denitratisoma oestradiolicum
Pathway
doe00550
Peptidoglycan biosynthesis
doe01100
Metabolic pathways
doe01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
doe00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DENOEST_0569 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DENOEST_0569 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
doe01011
]
DENOEST_0569 (mrdA)
Enzymes [BR:
doe01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
DENOEST_0569 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
doe01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
DENOEST_0569 (mrdA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
DSRB
Motif
Other DBs
NCBI-ProteinID:
CAB1367734
UniProt:
A0A6S6YJ22
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Position
I:complement(548244..550130)
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AA seq
628 aa
AA seq
DB search
MEFKNPQDDLELFRSRLGIAGSFVLICFCLLLGRFFWLQVVQYNYYKTRAEENRISLVPI
VPNRGLILDRNGMVLARNYSAYTLEITPARVSNLDQIIDALSAIVDIQPKDRKRFRRLLD
ESKNFESLPIRNRLSDEEVARFIAHRYRFPGVDIKARLFRQYPTKDFASHLLGYIGRVND
RDLEKIENREQEDNYRGTEHFGKTGLEQHYEFELHGVTGFEQMEVDAGGHAVRTLARTAP
TAGNNLTLTVDAKLQQVAEKAFGDRRGALVAIEPSSGGILALVSMPNYDPNLFVDGIDPQ
NWEMLNDSTDKPMVNRALNGAYPPGSTFKPYMALAALELGKRKAESAIHDPGFFNFGGHQ
FRDDKKGGHGYVDMYASIVHSCDTYYYMLANDLGIDNISNFMRKFGFGQKSGVDIEGESE
GVLPSQEWKKKRFKRPEQQKWYAGETISIGIGQGYNSYTPIQLAQAMATLANDGVMFRPH
LVKYITDSKTGKQTPIEPKPLKTIPLKPEHLAVIKNAMVGVNNEGTGARAFAGAEYVSAG
KTGTAQVFSLKGAKYSEHSTKEHLRDHALFIAFAPADKPTIALAVLVENGGFGAQAAAPI
ARQVLDYYLLGKLPKEPAPADESATGGD
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
gtggaattcaagaaccctcaggacgatctggagctgttccgtagccggctgggtattgcc
ggaagcttcgtgctgatctgtttctgcctgttgctgggtcgatttttctggcttcaggtg
gtccagtacaactactacaagacccgggccgaggagaaccggatttccctggtacccatc
gtgcccaatcgggggctgatcctggaccgcaacggcatggtgttggcccgcaactattcg
gcctataccctggaaatcacgcccgcccgcgtatccaatctggaccagataattgacgca
ctttcggccatcgtggacatccagcccaaggatcgaaaacgcttccgacgcctgcttgat
gagtccaagaactttgagtcactgccaattcgcaaccgtctcagcgacgaggaggtggcc
cgtttcatcgcccatcgctaccgtttccccggtgtcgatatcaaggcccggctgttccgc
cagtaccccacaaaggacttcgcctcccacctgctgggttatatcggccgtgtcaatgat
cgggacctggaaaagatcgagaacagggaacaggaagacaactaccggggcaccgagcat
ttcggcaagaccggtctggagcagcactacgagttcgaactgcacggcgttaccggcttc
gagcagatggaagtagatgcaggtggccacgcggtgcgcaccctggctcgcacggcgccg
acggccggcaacaatctgaccctgacggtggacgccaaactccagcaggtggcggaaaaa
gccttcggtgaccgtcgcggcgctctggtggccatcgagccctccagcggtggcatcctg
gccctggtgtccatgcccaactacgaccccaatctgttcgtggacggtatcgatccccaa
aactgggagatgctcaacgactccaccgacaagcccatggtcaaccgggcgctgaatggc
gcctaccctcccggctccaccttcaagccctacatggccctggcagccctggaactgggc
aagcgcaaggctgagagcgcgatccacgatccgggttttttcaactttggcggccaccag
ttccgggacgacaagaagggaggccatggttatgtggatatgtacgcctccatcgttcat
tcctgcgatacctattactacatgctggccaacgacctgggcatagacaatatctccaac
ttcatgcgcaagttcggcttcggccagaagagtggcgtcgacatcgagggtgaatcggaa
ggagtgctgccttcccaggaatggaagaagaaacgcttcaagcggcccgagcaacagaaa
tggtatgcgggggagaccatctccatcggcatcgggcagggctataacagctacacaccg
atccagttggcccaggccatggccaccctggccaacgatggcgtcatgtttcgaccccat
ctggtgaagtacatcaccgacagcaaaaccggcaagcagactccgatcgaacccaagccc
ctcaagaccattcccctcaagccggagcacctcgctgtgatcaagaacgccatggtgggc
gtaaacaatgagggcaccggcgcacgggcctttgccggcgccgaatatgtgtcggccggc
aagaccggcacggcccaggtgttctctctcaagggagccaagtattccgagcacagtacc
aaggagcacctgcgggaccacgccctgttcatcgccttcgcccccgccgacaagcccacc
attgccctggccgtcctggtggaaaacggcggcttcggcgcccaggctgcagcccccatc
gcccgccaggtgctcgactactatctgctgggcaagctgcccaaggagcccgctccggcg
gacgagagtgcgacgggaggcgactga
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