Denitratisoma oestradiolicum: DENOEST_0598
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Entry
DENOEST_0598 CDS
T06737
Symbol
ymfC
Name
(GenBank) 23S rRNA pseudouridine synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
doe
Denitratisoma oestradiolicum
Brite
KEGG Orthology (KO) [BR:
doe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
doe03009
]
DENOEST_0598 (ymfC)
Enzymes [BR:
doe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
DENOEST_0598 (ymfC)
Ribosome biogenesis [BR:
doe03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DENOEST_0598 (ymfC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
CAB1367763
UniProt:
A0A6S6XUG1
LinkDB
All DBs
Position
I:complement(577014..577580)
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AA seq
188 aa
AA seq
DB search
MAKFVLFNKPYGVMTQFTDTDGRPTLKDYIPLPGVYPAGRLDTDSEGLLVLTDNGPLQAR
IADPRHKLAKTYWAQVERIPDEEALARLRRGVDLGDFVTRPCQAQLMEEPADLWPRNPPI
RYRAAIPTAWLELVLKEGKNRQVRRMTAKVGFPTLRLIRWAVGPWNLEGLAPGEWRVIEA
ADLPPPTR
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
ttggccaagttcgtgttgttcaacaagccctacggggtgatgacccaattcaccgacacg
gatggacgccccaccctgaaggactacattcccctgccgggggtctatcccgccggccgc
ctggatacggacagcgagggcctgctggtgctgaccgacaacggcccgctccaggcgcgc
attgccgatccccgccacaagctggccaagacctactgggcccaggtggaacggataccc
gacgaggaggccctggcccggctgcgacgcggcgtggacctgggggatttcgtcacccgc
ccctgccaggcacagttgatggaagaacctgcggacctgtggccccgcaacccgccgata
cgctaccgggcagcgattcccaccgcctggctggaactggtgctgaaggaaggcaagaac
cggcaggtgcggcgcatgaccgccaaggtgggcttccccaccctgcgcctgatccgctgg
gccgtcggcccctggaacctggagggactggcgccaggggaatggcgggtgatcgaggcg
gcggacttgcccccgccgactcgatag
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