Denitratisoma oestradiolicum: DENOEST_1733
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Entry
DENOEST_1733 CDS
T06737
Symbol
holB
Name
(GenBank) DNA-directed DNA polymerase III, delta subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
doe
Denitratisoma oestradiolicum
Pathway
doe03030
DNA replication
doe03430
Mismatch repair
doe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
doe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DENOEST_1733 (holB)
03430 Mismatch repair
DENOEST_1733 (holB)
03440 Homologous recombination
DENOEST_1733 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
doe03032
]
DENOEST_1733 (holB)
03400 DNA repair and recombination proteins [BR:
doe03400
]
DENOEST_1733 (holB)
Enzymes [BR:
doe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DENOEST_1733 (holB)
DNA replication proteins [BR:
doe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DENOEST_1733 (holB)
DNA repair and recombination proteins [BR:
doe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DENOEST_1733 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA_16
AAA
AAA_5
AAA_22
AAA_25
DNApol3-delta_C
ArsA_ATPase
RNA_helicase
AAA_24
Motif
Other DBs
NCBI-ProteinID:
CAB1368898
UniProt:
A0A6S6XSD9
LinkDB
All DBs
Position
I:complement(1803104..1804099)
Genome browser
AA seq
331 aa
AA seq
DB search
MLGNPASLPHALLLAGPGGVGKSRFAAAMAARLLCEQPRGSWACGECDACRWQAGGNHPD
FRKVTLEVDDAEGDEASTKASSKKSGVATQIKIHQIRALEDFVFVGSHRHGNRVVIVDPA
DAMNGAAANSLLKILEEPPPSVYFIMVSSKWRSLLPTLRSRCRKVLFGVPETGAAVAWLK
QAGIKDPEMELGLAGGAPLRALARSERGTKDSTAEIIAPLSRQPLDPLTLAAHWESQLKV
NPELNLENLVDTVQKWLHDLIRVRAALAPRYLARENENLSRLAATADPARLNRCHDSLLK
VRATARHPLNTLLFLEDLAARCAVALTPARH
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
ttgctgggcaatcccgcaagcctgccccatgccttattgctggcaggccctggtggcgta
gggaaaagccgttttgccgctgccatggcagcgcgtttgctctgcgaacagcctcgaggc
agttgggcttgcggcgaatgtgatgcttgccggtggcaggcgggggggaatcatccggac
tttcgcaaggtcacccttgaggtggatgatgcggaaggcgatgaggcgagcaccaaggcc
agtagcaaaaaaagtggagttgccacccagatcaagattcatcagattcgagccttggaa
gactttgttttcgtcggcagccaccgccacggcaaccgtgtggtgatcgtggaccccgcc
gatgcgatgaatggggcagccgcgaattcacttcttaaaatacttgaggaaccacctcca
tcagtatattttataatggtttcttcaaaatggcgtagcctgctaccgactttgcgcagc
cgttgccgcaaagtactttttggcgttcctgaaacgggcgcggccgtcgcttggctcaaa
caggccggtatcaaggaccccgagatggagttgggcctggccggtggcgctcccttgcgc
gccctggctcgcagtgagcggggcaccaaggactccactgccgaaattattgctccgctg
tcccggcaacccctcgatcccctgaccctggccgcccactgggagagtcaactgaaggtc
aacccggaattgaatctggaaaacctggtggatacagtacaaaaatggctccatgacctg
attcgggtccgggctgcgctcgcaccccgctatctggcccgggaaaacgaaaacctctcc
cggctggccgccaccgccgacccggcccggctcaatcgttgccacgacagcctgttgaaa
gtcagagccacagcccgacatcctctcaacaccctgttattcctcgaagacctggccgcc
cgctgcgcggtcgccttgaccccggcccgacattga
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