Denitratisoma oestradiolicum: DENOEST_1773
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Entry
DENOEST_1773 CDS
T06737
Symbol
hupB
Name
(GenBank) HU, DNA-binding transcriptional regulator, beta subunit
KO
K03530
DNA-binding protein HU-beta
Organism
doe
Denitratisoma oestradiolicum
Brite
KEGG Orthology (KO) [BR:
doe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
doe03032
]
DENOEST_1773 (hupB)
03036 Chromosome and associated proteins [BR:
doe03036
]
DENOEST_1773 (hupB)
03400 DNA repair and recombination proteins [BR:
doe03400
]
DENOEST_1773 (hupB)
DNA replication proteins [BR:
doe03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
DENOEST_1773 (hupB)
Chromosome and associated proteins [BR:
doe03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
DENOEST_1773 (hupB)
DNA repair and recombination proteins [BR:
doe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
DENOEST_1773 (hupB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
CAB1368938
UniProt:
A0A6S6XSH5
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Position
I:complement(1834444..1834734)
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AA seq
96 aa
AA seq
DB search
MNKSELIEALATKADLSKAAAGRAVDVLVEEIVTAVAKGDSVTLVGFGTFKSAARAAREG
KNPKTGEKIKIAATTVPKFSAGATFKQEVAGKAKKK
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaatccgaactgatcgaagcgctggcaacaaaggctgatctttccaaggcggcc
gccggccgtgccgtggatgttctggtcgaagaaattgtgaccgctgtcgccaagggagat
tcggtgactctggtgggctttggtacgttcaagtcggcagcacgcgcagctcgcgaaggc
aagaacccgaaaaccggcgagaaaatcaagatcgctgcaacgacggtgccgaagttctca
gcgggcgccaccttcaaacaggaagtcgccggcaaagccaaaaagaagtaa
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