Denitratisoma oestradiolicum: DENOEST_2021
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Entry
DENOEST_2021 CDS
T06737
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
doe
Denitratisoma oestradiolicum
Pathway
doe03420
Nucleotide excision repair
doe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
doe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DENOEST_2021
03430 Mismatch repair
DENOEST_2021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
doe03400
]
DENOEST_2021
Enzymes [BR:
doe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DENOEST_2021
DNA repair and recombination proteins [BR:
doe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DENOEST_2021
MMR (mismatch excision repair)
Other MMR factors
DENOEST_2021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
UvrD_C_2
AAA_19
Viral_helicase1
AAA_30
AAA_22
PhoH
Ehbp
Motif
Other DBs
NCBI-ProteinID:
CAB1369186
UniProt:
A0A6S6YN56
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All DBs
Position
I:2085040..2086500
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AA seq
486 aa
AA seq
DB search
MRRNKSSGLGRLISDGERLSLIRRCWQQHAKRLPLESIVQAIDAAKSRLEWKPSECAEIE
AALQSYGEVLQAEGSVDFADLMLQAVRDIQSKTMPPLSIRWLLVDEAQDMDAVQMEWVKT
HADHGIEITLVGDDDQSLYSFRHAMGYEGLRHISEYLSSAVMSLPINYRCPENVLQHANR
LIAHNADRAPKNVEAFRKSPGVIDVIRLSDRWSEADLIASRIQAESEKAQWAILARTNNI
IDKVEVAFADRDIPYHRMGGKSVWNKTVGSTLLGLLRSVGDGSWTGVANALYFTGMAPRL
VNELSRIQGITCHERLDQIIAEYDHSTSPKSDETLLISLHDGMHDWVDQDKRERQALVIH
AVTAWLADRTTEENGTLLRRLEGILCRLNGSLSVRLMKAASRSKAVGKGAAIMTLHAAKG
LEFSNVWILGAEEGNLPHSDSTPEEERRLFYVGMTRSKNRLIVSSAAKEGSASRYITESE
LKPCQN
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgcaacaaaagttcaggactggggcgcctcatctccgatggcgagcgtctctcg
ctgattcgtcgctgttggcagcagcacgcaaagcgactgcccttggaaagcatcgtccag
gcaatcgatgcggccaagtccagactcgaatggaaaccgtcggaatgcgctgaaatcgag
gccgcccttcagagctacggtgaagttcttcaggcggagggatccgtcgattttgccgac
ctgatgctacaggccgttcgcgacatccagtcgaaaacgatgccgccactttcaattcgc
tggcttcttgtcgatgaagcgcaggacatggacgcggtacagatggagtgggtcaaaacc
catgccgatcacggcatcgagatcacgctggtcggcgacgacgaccagagcctgtactcg
tttcgccatgcgatgggttacgagggcctacggcacatctccgaatacctatcgtcggct
gtcatgtcccttccgatcaactaccgctgccctgaaaacgttcttcagcatgccaatcgg
ctgatcgcccataacgcggatcgtgcgccgaagaacgttgaggctttccgcaagtctcca
ggcgtcatcgacgtcattcggttatcagaccgatggagcgaggccgacttgatcgcatct
cgcatccaagccgagtcggagaaagcacagtgggcgatacttgcccgaaccaacaacatc
atcgacaaagtggaagtcgcatttgctgatagggacattccatatcaccgcatgggaggg
aagagcgtatggaacaaaaccgtgggcagcacactgctcgggctcttgcgatcagtaggc
gatggaagttggaccggtgttgccaatgcactgtacttcactggaatggctccccggctc
gtcaacgaactctctcggattcagggcatcacctgccacgaacgtctcgatcaaatcatc
gcggaatatgatcattctacgagtccgaaaagcgatgaaacgcttctgataagtctccac
gacggaatgcatgactgggtcgatcaagacaagcgggaacgccaggcattggtaattcac
gccgtcacggcctggctggctgatcgaaccacagaagaaaatggaacactattgcgtcgg
ctagaaggaattctgtgccggctcaacggcagtttgtcggtgcggctgatgaaagcggct
agtcggtcgaaagctgtcggcaaaggtgctgccatcatgacattgcacgcagcgaaagga
ttggagttttcgaatgtttggattctcggtgccgaggaaggcaacctaccccattcggac
tccacaccggaggaagaacggcggctcttttacgtcggaatgacccggtcgaaaaatcgg
ctgatcgtcagcagtgcggcgaaggaaggatcggcatccaggtacatcacggagtctgaa
ctcaagccctgccaaaactag
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