Denitratisoma oestradiolicum: DENOEST_2132
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Entry
DENOEST_2132 CDS
T06737
Symbol
uvrB
Name
(GenBank) excinulease of nucleotide excision repair, DNA damage recognition component
KO
K03702
excinuclease ABC subunit B
Organism
doe
Denitratisoma oestradiolicum
Pathway
doe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
doe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DENOEST_2132 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
doe03400
]
DENOEST_2132 (uvrB)
DNA repair and recombination proteins [BR:
doe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DENOEST_2132 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DENOEST_2132 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Kinesin
DUF87
FlaG
AAA_16
Motif
Other DBs
NCBI-ProteinID:
CAB1369297
UniProt:
A0A6S6XY67
LinkDB
All DBs
Position
I:complement(2199655..2201700)
Genome browser
AA seq
681 aa
AA seq
DB search
MGELIDFPNRAFRLHQPFPLAGDQPEAVAKLVEGIEDGLSFQTLLGVTGSGKTYTMANVI
ARLGRPALVMAPNKTLAAQLYSEFREFFPENAVEYFVSYYDYYQPEAYVPARDLFIEKDS
SINEHIEQMRLSATKSLMERRDVVIVATVSAIYGIGDPVDYHSMVLHLREGEKLGQRDII
RRLTEMQYERNEVEFQRGVYRVRGDVIDIFPAENAENALRVTLFDDEVESLSLFDPLTGQ
RRQKLPRFTVYPSSHYVTPRGTVLRAVEAIKGELRERIEFYQKEQKLVECQRIEQRTRFD
LEMLDQLGFCKGIENYSRHLSGRQPGEPPPTLIDYLPPDSLLFIDESHVTIGQVGGMYKG
DRSRKENLVNYGFRLPSALDNRPLKFAEFEGLMPQTVFVSATPSAYEEEHQGQVVEQVVR
PTGLVDPVVLVRPALSQVDDVLSEIKKRVAVEERVLVTTLTKRLSEQLTDYLADNGIRVR
YLHSDVDTVERVEIIRDLRLGEFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSTRS
LIQTMGRAARHLNGTAILYADRITDSMQRAMAETERRREKQLTFNTEHGIVPKGVTKRIK
DIIDGVYDAESANRERAHLKAAEEQARYEAMSAKQLAREIKRLEKAMQDHSRNLEFEQAA
AARDELFRLQKLVFGGEAHDA
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgggtgagctgatcgatttccccaaccgtgcttttcgcctgcaccagccctttcccctg
gccggcgaccagccggaagccgtcgccaaactggtggagggcatcgaggacggcttgtcc
ttccagaccctgctgggggtgaccggttccggcaagacctacaccatggccaatgtgatc
gcccgcctgggccggccggccctggtgatggcccccaacaagaccctggcggcccagctc
tattccgagttccgtgagttcttccccgagaacgcggtggagtatttcgtctcctactac
gactactatcagccggaagcctacgtgccggcccgggacctgttcatcgagaaggattca
tccatcaatgaacacatcgagcagatgcggctctcggccaccaagagcctgatggagcgg
cgcgacgtggtgatcgtggcgacggtgtcggccatctacggcatcggcgatccggtggat
taccacagcatggtgctgcatctgcgggagggcgaaaaactgggccagcgggacatcatc
cgccgcctgacggaaatgcagtatgagcgcaacgaggtggagttccagcggggcgtctat
cgggtgcggggggacgtgatcgacatcttcccggcggagaacgccgagaacgcgctgcgt
gtcaccctcttcgatgacgaggtggagtccctctccctgttcgatcccctcaccggccag
cgccggcagaagctgccccgcttcaccgtctatccttccagccattacgtcaccccccgg
ggcacggtgctgcgggcggtggaggccatcaagggggaactgcgggagcgcatcgagttc
tatcagaaggaacagaaactggtggagtgtcagcgcatcgagcagcgcacccgcttcgat
ctggaaatgctggaccagttgggcttctgcaagggcatcgagaactactcgcgccatctc
tccggccgccagccgggtgagccgccccccaccctgatcgactacctgcccccggactcc
ctgctgttcatcgatgagtcccacgtcaccatcggccaggtcggcggcatgtacaagggg
gatcgttcccgcaaggaaaacttggtcaattacggcttccgcctgccttccgccctggac
aaccggcccctgaagttcgccgagttcgagggcctgatgccccagaccgtgtttgtctca
gccacgccctcggcctacgaggaagagcaccagggccaggtggtggagcaggtggtgcgg
cccacgggcctggtggacccggtggtgctggtgcggcccgccctgagccaggtggatgac
gttctgagcgaaatcaagaagcgggtggcggtggaggagcgggtgctggtgacgaccctc
accaagcgcctgtccgagcagctgaccgattacctggccgacaatggcatccgggtgcgc
tacctgcattccgacgtggatacggtggagcgggtggagatcatccgggacctgcgcctg
ggggagttcgacgtgctggtgggtatcaacctgctgcgggagggcctggatattcccgag
gtgtccctggtggcgatcctggatgcggacaaggagggcttcctgcgctccacccgcagc
ctgatccagaccatgggccgggccgcccgtcacctcaacggcaccgcgattctttacgcc
gaccgcatcaccgactccatgcagcgggccatggccgaaactgaacggcgccgtgaaaaa
cagctcaccttcaatactgaacacggcattgttcccaagggtgtcaccaagcgcatcaag
gacatcatcgacggtgtctatgatgccgaatcagccaaccgggagcgggcacacctgaaa
gcagcggaagagcaggcccgctacgaggccatgagcgcaaagcaactggcccgggaaatc
aagcgtctggaaaaggccatgcaggaccactccaggaacctggaattcgaacaggctgcc
gctgcccgggacgaattgttccggctgcaaaaactggtctttggtggcgaggcccacgac
gcttga
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