Denitratisoma oestradiolicum: DENOEST_2829
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Entry
DENOEST_2829 CDS
T06737
Symbol
rhlE
Name
(GenBank) RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
doe
Denitratisoma oestradiolicum
Pathway
doe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
doe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DENOEST_2829 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
doe03019
]
DENOEST_2829 (rhlE)
Enzymes [BR:
doe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DENOEST_2829 (rhlE)
Messenger RNA biogenesis [BR:
doe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DENOEST_2829 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
AAA_22
SNF2-rel_dom
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
CAB1369988
UniProt:
A0A6S6XY92
LinkDB
All DBs
Position
I:2961802..2963205
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AA seq
467 aa
AA seq
DB search
MKFEDLGLLPELLRAVHEAGYTTPTPIQTQAIPIVLQGLDVMGGAQTGTGKTAGFTLPLL
QRLARHASTSPSPARHPVRALILAPTRELAMQVHDSVKTYSKYVPLRSVCIYGGVDIKPQ
IAELREGREIVVATPGRLLDHVEQKSVSFAQVEVLVLDEADRMLDMGFIPDIKRILAMLP
KARQSLLFSATFSDEIKKLADAMLKNPQLIEVARRNAISETITHRVHLVSTDHKRHLLLH
LLKESKLSQVLVFVGTKFGASRLATWLERQGVNADAIHGDKSQQQRTETLEAFKSGALQV
LVATDVAARGLDIDDLPHVINYELPHVAEDYVHRIGRTGRAGKKGDATSLASPEEKFRLT
DIEKLIKLKIEQVEVPGFDPGAAVKSEERGVRHGHLRERESRGVHGPRAAVKLPTPALRV
PTVAADGFDFSKPYAPKTQPGADAATETVPRRPLRPVAALLGGLGKK
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcgaagatctcgggctgttgcccgaactgctgcgtgccgtgcatgaagccggc
tacaccacacccaccccgatccagacccaggccattcccatcgtgttgcagggcctggat
gtcatgggcggcgcccagaccggcaccggcaagaccgcaggcttcaccctgcccctgctg
caacgcctggcccgccatgcctctacgtccccctccccggcccggcacccggtgcgcgcc
ctgatcctggccccgacccgtgaactggcaatgcaggtccacgacagcgtcaagacctac
agcaaatacgtgcccctgcgctcggtctgcatctacggcggcgtggacatcaagccccag
atcgccgagctgcgggaaggccgcgagatcgttgtcgccaccccgggccggttgctggac
cacgtggagcagaagagcgtgagcttcgcccaggtggaagtgctggtgctggacgaagcc
gaccgcatgctggacatgggcttcatcccggacatcaagcgcatcctggccatgctgccc
aaggcacgccagagcctgctgttttcagccaccttctccgacgagatcaagaagctggcc
gacgccatgctgaagaacccccagttgatcgaggtggcccggcgcaatgcgatcagcgag
accatcacccaccgggtgcatctggtcagcaccgatcacaagcgccacctattgctgcat
ctgctcaaggaatccaagctgtcccaggtgctggtcttcgtcggcaccaagttcggtgcc
agccggctggccacctggctggaacgccagggtgtcaacgccgacgccatccatggcgac
aagagccagcagcagcgcaccgaaaccctggaggccttcaagagcggcgccctccaggtg
ctggtggccaccgacgttgcggcccggggcctggacattgacgatctgccccatgtcatc
aactacgaactgccccatgtggccgaggactacgtgcaccgcatcggtcgcaccggccgc
gccggcaaaaagggggatgccacttccctggccagtcccgaggagaagttccgcctgacg
gacatcgagaagctgatcaagctgaagatcgagcaggtggaggttcccggcttcgatccc
ggcgccgccgtgaaaagcgaggagcgaggagtccgccacggtcacctgcgggagcgggag
agccggggtgtgcacggcccccgggctgcagtcaagctgccaacgcccgccctccgcgtc
cccaccgtcgccgccgacggtttcgatttcagcaaaccctacgcgccgaaaacccaaccc
ggcgccgacgcagccacggaaaccgtaccgcgccgcccactacggccggtggcagccttg
ctgggcggcctgggcaagaaataa
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