Denitratisoma oestradiolicum: DENOEST_3087
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Entry
DENOEST_3087 CDS
T06737
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
doe
Denitratisoma oestradiolicum
Pathway
doe00470
D-Amino acid metabolism
doe00550
Peptidoglycan biosynthesis
doe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
doe00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DENOEST_3087 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DENOEST_3087 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
doe01011
]
DENOEST_3087 (murD)
Enzymes [BR:
doe01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
DENOEST_3087 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
doe01011
]
Precursor biosynthesis
Amino acid ligase
DENOEST_3087 (murD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
NAD_binding_7
2-Hacid_dh_C
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
CAB1370241
UniProt:
A0A6S6Y0G3
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All DBs
Position
I:complement(3224848..3226404)
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AA seq
518 aa
AA seq
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MKLSGKHILVLGLGESGLAMAQWCTRQGARVRVLDSRAEPPFLSELRRSVPEVDFHCSAL
DERFDKALLAGIDLLALSPGLSGGLMAVIHARAQGIPVVGEIELFAWALQDLGLRGHEGP
YSRVIAITGTNGKTTTTALTGHLCREAGKMTGVAGNISPAALHALMAALDRGELPDIWVL
ELSSFQLETVDSLDADAATVLNISDDHLDRYIDLDEYASAKARIFAGRGVQVLNRDDARV
KRMALAGRSLVSFGLDAPGDERDFGLGQRGGEPWIVQGEHFLLPVSALPIAGLHNAANAM
AALALVEAVGFPAAGRLQALRSFRGLPHRVEKVAEIGGVGYYDDSKGTNVGATVAALEGL
GGQMAAKAMGNSRTPPPILPRQAGEVTSHPLPREGGWGEGKSMPAPRNEDDPRIVLIAGG
DGKGQDFVPLSLAIARYCRAVMLIGRDGPKIAEILAGSGVPFHQAADMDEAVRLASRAAQ
EGDAVLLSPACASFDMFRNYEHRALVFVAAVQALESAP
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgaagctttcgggcaaacacatcctcgttctcggcctcggcgaatccggcctggccatg
gctcagtggtgtacccgtcagggcgcccgggtacgggtgctggatagtcgcgccgaaccg
cctttcctgtccgaattgcgccgcagtgtgccggaggtcgactttcactgctctgccctc
gacgagcgtttcgacaaggcgctgttggccggcatcgatctgctggccctctcgccgggt
ttgtccggaggcctgatggcggtgatccatgcccgggcccagggcattccggtggtgggg
gagatcgaactgttcgcctgggctctgcaggatctggggctgcggggccatgagggcccc
tatagccgggtgatcgccattaccggcaccaacggcaagaccaccaccacggccctgacc
ggccatttgtgtcgggaggcgggcaagatgaccggggtggccggcaacatctcgccggcg
gccctccatgccctgatggccgccctggaccggggcgagctgccggatatctgggtgctg
gaactgtccagctttcagttggaaaccgtagacagtctcgatgccgatgcggccacggtg
ttgaacatcagcgacgaccatctggatcgctacatcgacctggacgaatacgccagtgcc
aaggcccgcatcttcgccgggcggggtgtgcaggtgctgaaccgggatgatgcacgggtg
aagcgcatggctctggcagggcgctccctggtcagctttggcctggatgcgccgggggac
gagcgggatttcggcctgggtcagcggggaggagagccctggatcgtccagggggaacac
ttcctgctgccggtttccgctctgcccatcgccggcttgcacaacgctgccaacgccatg
gctgccctggccctggtggaggcggtggggtttcctgctgcgggtcgactgcaggccttg
cgcagcttccgtggtctgccccatcgggtggagaaggtggccgagatcggtggcgtcggt
tactacgacgactccaagggcaccaatgtgggggcaactgtcgcagccttggaaggcctt
ggtggccagatggccgccaaggccatggggaattcgaggacaccccctcccatcctcccc
cgccaggcgggggaggtgactagtcacccccttccacgggaaggggggtggggggaaggt
aaatccatgccggccccccgcaatgaagacgatccacggatcgtcctcattgcggggggc
gatggcaagggtcaggacttcgtgcccctgagtctggcgattgcgcgctactgccgggct
gtgatgctgatcggccgggacggaccgaagatagctgagatccttgcgggaagcggcgtc
ccctttcatcaggcggcggatatggatgaggcggtgcgactggccagccgggctgcccag
gagggtgacgcggtgctcttgtcaccggcctgcgccagttttgacatgttccgcaactac
gaacatcgcgccctggtttttgtggccgcggtgcaagccctggagtcggcgccttga
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