Denitratisoma oestradiolicum: DENOEST_3112
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Entry
DENOEST_3112 CDS
T06737
Symbol
rpoA
Name
(GenBank) RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
doe
Denitratisoma oestradiolicum
Pathway
doe03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
doe00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DENOEST_3112 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
doe03021
]
DENOEST_3112 (rpoA)
03400 DNA repair and recombination proteins [BR:
doe03400
]
DENOEST_3112 (rpoA)
Enzymes [BR:
doe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DENOEST_3112 (rpoA)
Transcription machinery [BR:
doe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DENOEST_3112 (rpoA)
DNA repair and recombination proteins [BR:
doe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DENOEST_3112 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
SLT
Motif
Other DBs
NCBI-ProteinID:
CAB1370266
UniProt:
A0A6S6YC86
LinkDB
All DBs
Position
I:complement(3246102..3247085)
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AA seq
327 aa
AA seq
DB search
MQSNALLKPRIIDVQTLSPVHARVVMEPFERGYGHTLGNALRRILLSSLPGAAPTEVAIE
GVLHEYSTLEGVREDVVDILLNMKGVVLKLHNRSEATLNLSKMGEGVVTAADIETSHDVE
IINPDHVIAHVAPGGKLDMQIKVETGRGYEPANVRPSAKEEGKIIGRILLDASFSPVRRV
SYQVESARVEQRTDLDKLIIDLETNGAVDPEESIRYAARILMDQLSVFADLENTAVAAVE
QKQIPVAPELLRPVDDLELTVRSANCLKAENIYYIGDLIQRTETELLKTPNLGRKSLNEI
KEVLASRGLTLGMKLENWPPAGLEKLG
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagcaacgctcttctgaagcctcgcatcattgatgtccagacattgtcgcccgtc
catgcccgcgtggtgatggaaccgttcgagcgggggtatggccacacgctggggaatgcg
ttgcgccgcattcttttgtcttccctgcctggcgctgccccgaccgaagtggccattgag
ggcgtgctgcacgagtactccaccctggagggcgtgcgcgaggacgtggtcgacatcctg
ctcaacatgaagggcgtggtgctcaagctgcacaatcggagcgaggcgacactgaacctg
tccaaaatgggtgaaggggttgtaaccgccgccgatatcgagaccagtcacgatgtggaa
atcatcaatccggatcatgtgatcgcacacgtggcgcccggtggcaagctcgacatgcag
atcaaggttgaaaccggtcgcggctatgagccggccaatgttcgtccctctgctaaggag
gaaggcaagatcatcggtcggattctgctcgatgcctctttcagtccggtgcggcgtgtc
agctaccaagtggagtcggcccgggttgagcagcgtactgacctggacaagctgatcatt
gatctggagaccaatggcgcggtggacccggaagagtccattcgctatgccgcccgtatc
ctgatggatcaattgtcggtgtttgccgatctggaaaacactgctgtggctgcggttgag
cagaaacagattcccgtggcgcccgaactgctgcgtccagtagacgacttggaactcacg
gtccgctcggcgaactgtctgaaggccgagaatatctactacatcggcgatctgattcag
cgtaccgaaaccgaactgctgaagaccccgaaccttggccgcaagtcactcaacgagatc
aaggaagtgttggcctcccgtggcctcacgctgggtatgaagttggaaaactggccccct
gccgggcttgaaaagctgggctga
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