| Entry |
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| Symbol |
rpoC
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| Name |
(GenBank) DNA-directed RNA polymerase beta' chain (Transcriptase beta' chain) (RNA polymerase beta' subunit)
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| KO |
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| Organism |
doe Denitratisoma oestradiolicum
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:doe00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DENOEST_3143 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:doe03021]
DENOEST_3143 (rpoC)
03400 DNA repair and recombination proteins [BR:doe03400]
DENOEST_3143 (rpoC)
Enzymes [BR:doe01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DENOEST_3143 (rpoC)
Transcription machinery [BR:doe03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DENOEST_3143 (rpoC)
DNA repair and recombination proteins [BR:doe03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DENOEST_3143 (rpoC)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
I:complement(3264240..3268442)
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| AA seq |
1400 aa
MKALLDLFKQVTQEEEFDAITIGLASPDKIRSWSYGEVKKPETINYRTFKPERDGLFCAK
IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQAKVRRERMGHIELASVVAHIWFLKSL
PSRLGMVLDMTLRDIERVLYFEAFVVVEPGMTPLSRAQLLTEDDYLAKVEEYGDEFTAVM
GAEGIRELLRTIDIAHEIERLRQELETTGSEAKIKKIAKRLKVLEAFQQSGIRPEWMVLE
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELKAPDIIVRNEKRMLQ
ESVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKSGRFRQNLLGKRVDYSGRSVIVVGPQ
LKLHQCGLPKKMALELFKPFIFERLEKMGIASTIKAAKKEVEAETGVVWDILEEVIREHP
VLLNRAPTLHRLGIQAFEPTLIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQMEA
RTLMLASNNVLSPANGAPIIVPSQDVVLGLYYATREHVAARGTGMNFIDVSEVLRGVESR
QVDLHARISVRIKEYDRDGEGWKEKLTRYSTTAGRAILSEILPRGLPFKVIDKALKKKEI
SKLIDESFRRCGLKDTVVFADQLMQSGFRLATRGGISIAVDDMLVPTQKGAIIDQAESEV
KEIERQYTSGLVTVGERYNKVVDIWGRAGDQVAKAMMDQLSHQEVVNHEGKTVKQESFNS
IYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIEVPITTNFREGLNVQQYFISTHGARK
GLADTALKTANSGYLTRRLVDVTQDLVVTELDCGTQSGFAMKALVEGGEVIEPLRERILG
RVVATDVLNPDTQDILFAAGSLLDEDAVDLIESLGIDEVRVRTPLSCETRYGLCAKCYGR
DLGRGYLVNEGEAVGVVAAQSIGEPGTQLTMRTFHVGGAASRAAAQSQVEAKSSGVIRLS
ATMRYVTNPRAEKVVIARSGEVLIVDDNGRERERHKVPYGATLLVDDGQQIKAGAQVANW
DPHTRPIVTEYAGTVKFEHVEEGATVAKQIDEVTGLSTLVVIESKGRGSKASTKGLRPQV
KLLDEHGQEIKIHGTDHVVTITFQVGSIITVKDGQLVSVGEILARIPQESAKTRDITGGL
PRVAELFEARSPKDVGVLAEVTGTVSFGKDTKGKQRLVITEPDGTAHEYLISKDKHVMAH
DGQVVNKGEVIVDGSADPHDILRLKGVEELARYIIDEVQDVYRLQGVKINDKHIEVIVRQ
MLRRVVVTDTGDSTFIREEQVERSMLLDENDRLLSEGKRPAEYQHQLLGITKASLSTDSF
LSAASFQETTRVLTEAAIMGKRDELRGLKENIIVGRLIPAGTGHVYHRTRRKKSAGVDAA
EGVFELPPVEESSAEGTQAA |
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| NT seq |
4203 nt +upstreamnt +downstreamnt
atgaaagcactgctcgatctattcaagcaagtcacgcaggaagaggaattcgatgcgatc
accatcggtttggcctcgcctgacaaaatccgttcctggtcctacggtgaagtaaaaaag
ccggagaccattaattaccgtaccttcaagccggagcgggacggcctgttctgcgccaag
atattcggcccggtgaaggactacgagtgcctttgcggcaagtacaagcgcctcaagcac
cgcggcgtgatctgcgagaagtgtggcgtcgaggtcacccaggccaaggtacggcgcgaa
cgcatgggccatattgaactggccagcgtggtagcacacatctggttcctcaagtccctg
cccagccgccttggcatggttctggacatgaccctgcgcgacatcgaacgtgtcctctat
tttgaggccttcgtcgtggtcgagcccggcatgacgcccttgagccgtgcccagttgctg
accgaggatgactatctggccaaggtcgaggagtacggcgacgagttcaccgcggtgatg
ggcgccgagggtattcgcgagctgctgcgcaccatcgacatcgctcatgaaatcgagcgc
ctgcgccaggagctggagaccaccggctcggaagccaagatcaagaagatcgccaagcga
ctcaaggtgctggaagccttccagcagtccggcatcaggcccgagtggatggtgttggaa
gtgctgccggtactcccccctgatctgcgcccccttgtacccctggacggtggccgtttc
gccacctcggatctgaacgatctgtatcgtcgggtgatcaaccgcaacaatcgtctgaag
cggctgctggaactgaaggcgccagacatcattgtgcgcaacgagaagcgcatgctgcag
gaatcggtggattccctgctggacaacggtcgccgcggcaaggccatgaccggcgccaac
aagcgtcccctgaagtccctggccgacatgatcaagggcaagtcgggccgcttccgccag
aacctgctaggcaagcgggtggactattccggtcgttcggtgatcgtggtgggcccccag
ctcaagctgcatcagtgcggcttgcccaagaagatggcactggaactgttcaagcccttc
atcttcgaacgcctggaaaaaatgggtatcgccagcaccatcaaggccgccaagaaggaa
gtggaagccgagaccggtgtggtgtgggacattctggaagaggtgatccgcgagcatccg
gtgctgttgaaccgggcgccaaccctgcaccgactgggcattcaggcttttgagccgacc
ctgatcgaaggcaaggccattcagctccatcccctggtgtgtaccgccttcaacgctgac
tttgacggcgaccagatggccgtccacgtcccgttgtccctggaagctcagatggaggcc
cgcacactgatgctggcttccaacaacgtgctgtcgcccgccaacggcgcccccatcatt
gttccttcccaggatgtggtgctgggcctgtactacgccacccgggaacacgtcgcggcg
cgtggcaccggcatgaacttcattgatgtctccgaggtgttgcgtggtgtggaatcccgt
caagtggatctgcatgcccgtatctcggtgcggatcaaggaatacgaccgtgatggcgag
ggttggaaggaaaagctgacccgctactccactactgccggccgcgccatcctgtcggag
attctgccccgaggtcttcccttcaaggtgatcgacaaggcactgaagaagaaagaaatc
tccaagctgattgatgagtccttccgccgttgcggtctcaaggataccgtggtgtttgcg
gaccagttgatgcagtctggttttcgtctggccacccgaggcggtatttccattgccgtg
gatgacatgctggtacccacccagaagggtgccatcatcgaccaggctgaaagcgaggtt
aaggaaatcgagcgtcaatacacttccggtctggtgaccgtgggggagcgctacaacaag
gttgtggatatctggggccgcgccggcgatcaggtagccaaggcgatgatggaccagttg
tcccatcaggaagtggtcaatcacgaaggcaagaccgttaaacaggagtccttcaactcc
atctacatgatggcggactccggtgcacggggttccgctgcccagattcgccagttggcg
ggtatgcggggcctgatggccaagcccgatggctccatcatcgaagtgcccatcaccacg
aacttccgtgagggactgaatgttcagcagtacttcatctctacccacggcgcccgtaag
ggtctggcagacacggcgctgaagaccgcgaactccggctatctaacccgtcgtctggtg
gatgtgactcaggatctggtggtgaccgagctggattgcggcacccagagcggcttcgcc
atgaaggcgttggtggaaggcggcgaagtgatcgagccgttgcgcgaacgtatcctgggt
cgggtggtggcaaccgacgtactcaatcccgatactcaggacattctgttcgcggctggc
tccctgcttgatgaagatgcggtggacctgatcgagagcctgggtatcgacgaagtgcgg
gtgcgtacgccgctgtcctgtgagacccgttatggcctgtgtgccaagtgctatggtcgt
gacctgggtcgtggctatctggtgaacgagggtgaagcggttggtgtggttgccgcccag
tccatcggtgaacccggaacacagttgaccatgcggactttccacgtgggcggcgctgct
tcccgtgctgcggcacagagtcaggtcgaggctaagagttcgggtgtaatccgcctgtcg
gccaccatgcgctatgtcaccaacccgagggccgaaaaggtggtcattgctcgttccggt
gaggtactcatcgttgacgataatggtcgcgagcgtgagcgccataaggttccctatggc
gcgacgctgttggttgacgacggtcagcagatcaaggccggcgcccaggtggccaactgg
gatccccacacacgccccattgttaccgagtacgcaggtacggtgaagttcgaacatgtg
gaggaaggtgcgactgttgccaagcagatcgacgaagtgaccggcctgtccactctggtg
gtgatcgagtccaagggacggggcagcaaggcctcgaccaagggcctgcgcccccaggtc
aagcttctggatgagcacggccaggaaatcaagatccatggcaccgatcatgtggtgacg
atcaccttccaggttggctcgatcattaccgtgaaggatggacagttggtttccgtcggg
gaaattctggcacgtattccccaggagtcggccaagacccgcgacattaccggcggtctg
ccccgcgtggccgaattgttcgaagcacgctcgcccaaggatgtcggcgtgctggccgag
gtgacaggtactgtctccttcggcaaggacaccaagggcaagcaacgcctggtgatcacc
gagcccgacggcactgcccacgagtacctgatctccaaggacaagcatgtcatggcccac
gatggccaggtggtgaataagggcgaggtgatcgtggacggctctgcggatccccacgat
atcctgcgcctgaagggtgtcgaggagctggcccgttacatcatcgacgaagtgcaggac
gtgtatcgtctgcaaggcgtgaagatcaacgacaagcatatcgaggtcatcgtgcgccag
atgctgcggcgggtggtcgttaccgacacaggcgactccacgttcattcgcgaggagcag
gtggagcgttccatgttgttggacgagaatgacaggctgttgtccgagggcaagcggccg
gccgaataccagcatcagttgctgggtatcaccaaggcatccctctccactgattccttc
ctttcggcggcatcgttccaggagaccactcgcgtactgaccgaggcggcgatcatgggc
aagcgcgatgagctgcggggcctcaaggaaaacatcattgttggccgtctcatccctgcc
ggtactggccatgtttaccatcggacccggcgcaagaagtctgcgggggtggatgcggca
gagggcgtgttcgaattgcctcccgtggaggaaagttcagcggagggtactcaagccgct
tga |
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