Denitratisoma oestradiolicum: DENOEST_3207
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Entry
DENOEST_3207 CDS
T06737
Symbol
polA
Name
(GenBank) fused DNA polymerase I 5'->3' exonuclease; 3'->5' polymerase; 3'->5' exonuclease
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
doe
Denitratisoma oestradiolicum
Pathway
doe03030
DNA replication
doe03410
Base excision repair
doe03420
Nucleotide excision repair
doe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
doe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DENOEST_3207 (polA)
03410 Base excision repair
DENOEST_3207 (polA)
03420 Nucleotide excision repair
DENOEST_3207 (polA)
03440 Homologous recombination
DENOEST_3207 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
doe03032
]
DENOEST_3207 (polA)
03400 DNA repair and recombination proteins [BR:
doe03400
]
DENOEST_3207 (polA)
Enzymes [BR:
doe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DENOEST_3207 (polA)
DNA replication proteins [BR:
doe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
DENOEST_3207 (polA)
DNA repair and recombination proteins [BR:
doe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
DENOEST_3207 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DENOEST_3207 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
CAB1370361
UniProt:
A0A6S6Y0R9
LinkDB
All DBs
Position
I:3329275..3332028
Genome browser
AA seq
917 aa
AA seq
DB search
MSKLLLVDGSSYLYRAFHALPDLRNRAGEPTGAIYGVISMLRRLEADHSADFRAVVFDAK
GKTFRDDWYPAYKAQRPPMPEDLVAQIEPLHACVRALGWPILMIEGVEADDVIGTLTRQA
SEQEIDCIVSTGDKDLAQLVNSRVRLVNTMSNEMLDEAGVLTKFGVPPTRIVDYLTLVGD
TVDNVPGVEKVGPKTAVKWLNQYGSLDAIIEHAAEIKGAVGDNLRHHLDFLPLGRKLVTV
ACDLELPLAPTDLSPQAHDNAQLAELFARLEFKTWLKEVESGALAPLAERNSTRSPAAAE
SVPAKAEALTTLDRSGYETLLAWPDLERWLHKIEAAPLTALDTETTSLDSMQARLVGISF
AVEEAGRIAAAYLPLGHSYAGAPDQLPLAEALEKLRPWLESNAHPKLGQHLKYDRHIFAN
HGINLRGIVEDTLLESYVLESDKSHDLGALASRHLGLATIAYDDITGKGAKRISFAQVAL
EQAAEYGAEDADITLRVHQHFAPQLAAEPRLERLYRDIELPAAEVLFRMERNGVLIDVFS
LARQSDELGRRLLQLEQEAHALAGQPFNLASPKQLAEILFTQQGLPVVKKTPSGTPSTDE
EVLSQLAEDYPLPKLLLQHRSLNKLKGTYTDKLPQMVNPATGRVHTSFSQAVAVTGRLAS
SDPNLQNIPVRTEEGRRIRSAFIAPPGHGLVSADYSQIELRIMAHLSNDERLLQAFAQGE
DVHRATAAEIFGITPLEVGPDQRRAAKVINFGLIYGMSAFGLARELGLERSAAAAYMERY
FARYPGVARYMEETRQAARDQGYVETVFGRRLWLPEIRSSNVGRRQGAERAAINAPMQGT
AADLIKLAMIAVQRWLEETALQSRLILQVHDELVLEVPDGELAQVKTALPRLMGGVARLA
VPLLVDVGAGPNWDEAH
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcttcttctcgtcgacgggtcttcgtacctctatcgtgccttccacgccctg
cccgacctgcgcaaccgggccggggaacccaccggagccatttacggcgtcatcagcatg
ctgcgccgcctcgaggccgatcatagcgcggacttccgggctgtggtgttcgatgccaag
ggcaaaaccttccgcgacgactggtatccggcatacaaggcccagcgcccccccatgccc
gaggatctggtggcccagatcgaacccctgcatgcctgtgtgcgcgccctgggctggccc
atcctgatgatcgaaggggttgaggccgacgacgtcatcggcaccctgacccggcaggcc
agtgagcaggagatcgactgcatcgtctccaccggcgacaaggacctggcccagttggtg
aattcccgggtccggctggtgaacaccatgagcaacgagatgctggacgaggccggcgta
ctgaccaagttcggtgtccccccgacgcgcatcgtggactacctgaccctggtgggagac
acggtggacaacgtgcccggcgtggaaaaggtggggcccaagaccgccgtcaaatggctg
aaccaatacggttccctggatgccatcatcgaacacgccgccgagatcaagggagcggtg
ggggacaacctgcgccaccacctggacttcctgcccctggggcgcaagctggtcaccgtg
gcctgcgatctggaactgcccctggcgccgacggacctgtcgccgcaagctcacgacaac
gcccaactggccgagttgtttgcccggctcgaattcaaaacctggctcaaggaagtcgaa
tccggcgccctggcgcccctggcggagcgaaacagcacaagatcaccggccgccgccgag
tccgtcccggccaaagcggaagcgctgacgaccctggaccgttccggctacgaaaccctg
ctcgcctggcccgacctggagcgctggctgcacaaaatcgaagccgcccccctcaccgcc
ctggacaccgagaccacctccctggactcgatgcaggcccggctggtgggtatctccttc
gcggtggaggaagccggcagaatcgcggcggcctacctgcccctgggccacagctatgcc
ggtgcgccggaccagttgcccctggccgaagccctggaaaaactccgtccctggctggag
tccaacgcccaccccaagctgggccagcacctcaaatacgaccgccacatctttgccaac
cacggcatcaatttgcgcggcatcgtcgaggacaccctgctcgaatcctatgtcctggag
agcgacaagagccacgacctgggcgccctggcctcccgccacctgggcctggccaccatc
gcctacgacgacatcaccggcaagggcgccaagcgcatctccttcgcccaggtggccctg
gaacaggccgctgaatacggcgccgaggacgccgacatcaccctgcgggtgcaccagcac
tttgccccccagctggcggcggagccacggctggagcggctctaccgggacatcgagctg
cctgccgccgaagtgctgttccgcatggagcgcaacggcgtgttgatcgacgtcttttcc
ctggcccggcagagcgacgaactgggccgacgcctgctgcaactggaacaggaggcccat
gccctggccggccagcccttcaacctggcctcccccaaacaactggcggaaatcctgttc
acccaacagggcctgccggtggtgaagaaaaccccttcgggcactccctccaccgacgag
gaggtgctgagccaactggccgaggactatcccctgcccaagctgctgctgcaacaccgc
agcctcaacaagctgaagggcacctacaccgacaagctgccccagatggtcaatcctgcc
acgggccgggtgcacaccagcttttcccaggcggtggcggtcaccggccggctcgcctcc
tcggaccccaatctacagaacatccccgtccgcaccgaggaagggcggcgcatccgctcc
gccttcatcgcgccgccgggccacggcctggtctccgccgactattcccagatcgagctg
cgcatcatggcccatctctccaacgacgaacggctgttgcaggccttcgcccagggggag
gacgtgcaccgggccacggcggcggagatcttcggcatcacccccctggaagtgggcccc
gaccagcgccgggccgccaaggtgatcaacttcggcctgatctacggcatgagcgccttc
ggcctggcccgggagctgggcctggagcgcagcgccgccgccgcttatatggagcgctac
ttcgcccgctaccccggcgttgcccgctacatggaagaaacccgccaggccgcccgggac
cagggctatgtggaaaccgtcttcggtcgccgcctctggctgcccgagatccgctccagc
aacgtgggccgccgccagggggccgagcgcgccgccatcaatgcgccgatgcagggcacg
gcggcggacctgatcaagctggccatgatcgccgtacagcgctggctggaggaaacagcc
ctgcaatcccggctgatcctgcaagtccatgacgaactggtattggaagtacccgacggc
gaactggcccaggtcaagactgccctgccccgcctgatgggcggcgtcgccaggctggcg
gtacccctgctggtggacgtgggtgccggccccaactgggacgaggcccactga
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