Denitratisoma oestradiolicum: DENOEST_3220
Help
Entry
DENOEST_3220 CDS
T06737
Symbol
msbA
Name
(GenBank) Lipid A export ATP-binding/permease protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
doe
Denitratisoma oestradiolicum
Pathway
doe02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
doe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
DENOEST_3220 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
doe02000
]
DENOEST_3220 (msbA)
Enzymes [BR:
doe01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
DENOEST_3220 (msbA)
Transporters [BR:
doe02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
DENOEST_3220 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_28
DEAD
AAA_16
AAA_22
AAA
nSTAND3
ABC_ATPase
AAA_24
NACHT
RsgA_GTPase
ABC_membrane_2
AAA_5
AAA_29
AAA_18
AAA_30
AAA_25
AAA_33
APS_kinase
SbcC_Walker_B
Mg_chelatase
RrnaAD
AAA_17
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
CAB1370374
UniProt:
A0A6S6XWH6
LinkDB
All DBs
Position
I:complement(3343616..3345373)
Genome browser
AA seq
585 aa
AA seq
DB search
MTGSVQQSTLLYRRLLQYVRPYGKVLAFAIGAMILAASTEPLFPALMKPLLDKGFNGSGE
QHLYRYPLFIVLIFLARGIFGYVASYCMNWVSNRVVCDIREVMFERLIRLPLGYLHSNPS
SRLITRIASDVNSVAAAATSVITTVLRDSLVVVGLMSWLLYLNWRLTLLMGLIVPGIAIA
IRGFSKRLRTMTRASQETNATIIQVLQESIDGNKVVKVYNGEPQELARFGKANNDLRRFA
VRQNVAAAATTPIVQFFASIAVALVVYIALLQSSGQQTTVGGFVSFITAMLMLLAPIKSL
TDVNAPLQRGLAAAESVFTLLDQKPEDDRGTVTLARAEGRLRFEGVRFRYPGAEREALAG
IDLDVAPGQTVALVGPSGSGKTTLANLLPRFYHLNEGRILLDGHELEELRLESLRANLAL
VSQDVVLFDDTVAANIAYGALRGASRADVEAAARAAYAHDFIMAMPQGYDTQIGENGVRL
SGGQRQRLAIARALLKNAPLLILDEATSALDSESERQVQAALEHLMEDRTTLVIAHRLST
IEKADKIVVMEHGRVIEQGSHAELLAQDGLYAKLYKMQYALEHTA
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgaccggttccgtgcagcagagtacccttctctatcgtcgtctgcttcagtacgtgcgg
ccctatgggaaggtgctggctttcgccattggggccatgatcctggcggcttccaccgag
cccctgtttcctgccctgatgaagcccctgttggacaagggcttcaacggtagcggcgaa
cagcacctgtaccgctatcccctgttcatcgtgttgatcttcctggctcggggcatcttc
ggctatgtggcctcctattgcatgaactgggtgtccaaccgggtggtctgcgacatccgg
gaagtgatgttcgagcgcctgatccggctacccctgggctatctgcacagcaatccgtcg
agccgcctgattacccgcatcgcctccgatgtgaactcggtggccgccgccgccacctcg
gtgatcaccacggtgctgcgggactccctggtggtggtggggctgatgtcctggctgctc
tatctcaactggaggctgaccctgctgatgggcctgatcgtgcccggcatcgccatcgcc
atccgcgggttttccaagcgcctgcggaccatgacccgggccagccaggagaccaacgcc
accatcatccaggtgctgcaggaatccatcgacggcaacaaggtggtcaaggtctataac
ggcgaaccccaggaactggcgcgctttggcaaggccaacaacgacctgcgccgcttcgcc
gtgcgccagaacgtggcggcggcggccaccacgcccatcgtgcagttcttcgcctccatc
gccgtggccctggtggtctatatcgccctgctccagtcctcggggcagcagaccacggtg
gggggcttcgtctccttcatcaccgcgatgctgatgctgctggcgccgatcaagagcctg
accgacgtgaacgcgcccctgcagcggggcctggccgccgccgaaagcgtgttcaccctg
ctggaccagaagcccgaggacgaccggggtaccgtgaccctggcccgtgccgagggccgg
ctgcgtttcgaaggggtgcgcttccgttatcccggggcggaacgggaggccctggcgggc
atcgacctggacgtggcgccgggccagaccgtggccctggtggggccctcgggcagtggc
aagaccaccctggccaacctgctgccccgcttctatcacctcaacgagggccgcatcctg
ctcgacggccacgaactggaggaactgcggctggaaagtctgcgggccaacctggccctg
gtgagccaggacgtggtgctgttcgacgacaccgtggccgccaacatcgcctacggtgcc
ctgcgcggcgcctcccgggcggacgtggaagcggcggcccgggccgcctacgcccacgac
ttcatcatggccatgccccagggctacgacacccagatcggcgaaaacggcgtgcgcctc
tccggcggccagcgccagcgcctggccatcgcccgggccctgctgaaaaatgcgcccctg
ctgatcctggacgaggctacctcggccctggactccgaatccgagcgccaggtccaggcg
gccctggaacacctgatggaagatcgcaccaccctggtcatcgcccatcgtctgtccact
atcgaaaaggccgacaaaatcgtggtcatggagcacggccgcgtcattgagcagggcagc
catgctgaactgctggcccaggacgggctttacgccaagctctacaagatgcaatacgcc
ctggagcacacggcatga
DBGET
integrated database retrieval system
