Denitratisoma oestradiolicum: DENOEST_3534
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Entry
DENOEST_3534 CDS
T06737
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
doe
Denitratisoma oestradiolicum
Pathway
doe00300
Lysine biosynthesis
doe00470
D-Amino acid metabolism
doe01100
Metabolic pathways
doe01110
Biosynthesis of secondary metabolites
doe01120
Microbial metabolism in diverse environments
doe01230
Biosynthesis of amino acids
Module
doe_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
doe00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DENOEST_3534 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DENOEST_3534 (dapF)
Enzymes [BR:
doe01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
DENOEST_3534 (dapF)
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
CAB1370688
UniProt:
A0A6S6Y000
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Position
I:complement(3680610..3681455)
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AA seq
281 aa
AA seq
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MKIPFTKMQGLGNDFVVLDAVTGSFVPNPAQVRFLADRHFGVGCDQLLVVEKPGSPEVDF
RYRIFNADGGEVEQCGNGARCFARFVTDAGLTDKREIRVETRCGVIAPRLEADGQVTVDM
GLPRFAPAEIPFVSDSDAVIQPLAAAGREWMISVVSMGNPHAVQVVGAVDSAPVAEDGPL
IENHPRFPRRVNAGFMEIVDRHAIRLRVHERGAGETLACGTGACAAVVAGIRRGLLDTPV
RVSTRGGELSIAWSGPDTPVLMTGPAVTVFQGEIELPEDLS
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatccccttcaccaagatgcagggcctgggcaatgacttcgtggtgctcgacgcc
gtcaccggcagcttcgtgcccaacccggcccaggtccgcttcctcgccgaccgccacttc
ggcgtgggctgcgaccagctcctggtggtggaaaagcccgggagtcccgaggtggatttc
cgctaccgcattttcaatgccgatggcggcgaggtggaacagtgcggcaacggcgcccgc
tgctttgcccgcttcgtcaccgacgcgggccttaccgacaagcgcgagatccgggtcgag
acccgctgcggggtgatcgcgccgcgcctggaggccgacggccaagtcaccgtggacatg
ggcctgccccgcttcgctccagcggagattcccttcgtcagcgacagcgacgcggtgatc
cagcccctggctgcggcgggacgggagtggatgatcagtgtggtctccatgggcaatccc
catgcggtgcaggtggtgggcgctgtggacagcgcgccggtggccgaggacggccccctg
atcgaaaaccatccgcgcttcccgcgtcgggtcaatgccggcttcatggagatcgtggac
cgtcacgccatccgcttgcgggtccatgagcgcggcgccggtgagaccctggcctgcggc
accggcgcttgcgccgccgtggtggcgggcatccgccgggggctgctggatacaccggta
cgcgtgtccacccggggcggcgagctttccatcgcctggagcggccccgataccccggta
ctgatgaccggccctgccgttaccgtgtttcaaggcgaaatcgaacttcccgaggacctg
tcatga
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