Entry |
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Symbol |
uvrD
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Name |
(GenBank) DNA helicase II
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KO |
|
Organism |
doe Denitratisoma oestradiolicum
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Pathway |
|
Brite |
KEGG Orthology (KO) [BR:doe00001]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DENOEST_3603 (uvrD)
03430 Mismatch repair
DENOEST_3603 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:doe03400]
DENOEST_3603 (uvrD)
Enzymes [BR:doe01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DENOEST_3603 (uvrD)
DNA repair and recombination proteins [BR:doe03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DENOEST_3603 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
DENOEST_3603 (uvrD)
|
SSDB |
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Motif |
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Other DBs |
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LinkDB |
|
Position |
I:complement(3765416..3767731)
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AA seq |
771 aa
MNHLLENLNPEQLAAVTLPPQHALILAGAGSGKTRVLTTRIAWLISTRQVTPQGILAVTF
TNKAAKEMLARLSALLPINTRGMWIGTFHGLCNRLLRAHYRDAGLPQLFQILDIADQQAA
IKRLLKALNVDDEKFPPRDLQHFINAQKEQGLRSAAVEAWDDHTRRRVELYAAYEQQCQR
EGVVDFAELLLRCYELLERNEPLRRHYQERFRHILVDEFQDTNILQYRWLKLLAGHAERG
RAAGPSQGAAALSMEAASAAEPPSPPPLGRGMGGGCMECACMFAVGDDDQSIYGFRGAEI
GNMRDFEREFQVDNIIRLEQNYRSHGNILDAANAIIKNNEKRLGKNLWTDAGSGEPIRVF
EAMSDGEEARWIVEEVRALSRDGHARREIALLYRSNAQSRILEHSLFSAGIPYRVYGGLR
FFERQEIKHALAYLRLIANSDDDTAFARVVNFPARGIGARSIEALQDAARAAGSSLFAAI
PQVPGKAGASLAAFAALIESMRPALDLPLPELVDHVVELSGLRLHYLNEKEGQERLANLD
ELLNAATSFVAEEGREVMEPEEAESTGEPTGELSADLAAFLTHAALEAGEHQAGEGDDAL
QLMTVHSAKGLEFNVVFMSGLEEGLFPHENSVQEAKGLEEERRLMYVAVTRARQRLYLSF
AQTRMLHGQTRYSLPSRFIDEIPGELLKWLTPKAKKGGYAYEVADAFTPSPRSRVSSGGG
LRVGQNVAHARFGQGVIVNAEGSGSDARVQVNFGPAGMKWLALSVAKLEAL |
NT seq |
2316 nt +upstreamnt +downstreamnt
atgaatcatctcctcgaaaacctcaatcccgagcagcttgccgctgtcaccctgccgccc
cagcatgccctgatcctggccggtgccggctccggcaagacccgggtgctgaccactcgc
atcgcctggctgatttccacccgccaggtgacgccccagggaatactggcggtgaccttc
accaacaaggcggccaaggaaatgctggcccggctctcggccctgctgcccatcaataca
agggggatgtggatcggaaccttccacggcctgtgcaaccgcctgctgcgggcccattac
cgggacgcgggcctgccccagttgttccagattctcgacatcgccgaccagcaggccgcc
atcaagcgcctgctgaaggccctcaacgtggatgacgagaagtttccgccccgggatctg
caacacttcatcaatgcccagaaggaacagggtttgcgctccgccgccgtggaggcctgg
gatgaccacacccggcgccgcgtcgagctttacgccgcctacgaacagcagtgccagcgg
gaaggcgtggtggatttcgctgaacttctcctgcgctgctacgaactgctggaacgcaac
gaacccctgcgccgccactaccaggagcgcttccgccacatcctggtggatgagttccag
gacacgaacattcttcaatatcgctggctgaagctcctggcagggcatgcggaacggggc
cgtgccgccgggccgtcccaaggcgcggcagcgttatccatggaggccgcatcagcggcc
gaacccccgtcacccccgcccttggggcgggggatggggggtgggtgcatggagtgcgct
tgcatgttcgcggtgggagatgatgaccagtcgatctacggttttcgcggcgccgagatc
ggcaacatgcgggacttcgagcgggaattccaggtggacaacatcatccgcctggagcag
aactaccgctcccacggcaacatcctcgatgccgccaatgccattatcaagaacaatgaa
aaacgcctgggcaagaatctgtggaccgacgccggttccggcgagccgatccgggtcttc
gaggccatgtccgacggcgaggaggcccgctggatcgtcgaggaagtgcgtgccctgagc
cgggacggtcatgctcgccgggagatcgccctgctctatcgcagcaacgcccagtcgcgg
atcctcgaacattccctgttctccgccggcattccttaccgggtctatgggggcctgcgt
tttttcgagcgccaggagatcaagcatgccctggcctatctgcgcctgatcgccaacagc
gacgatgacacggctttcgcccgggtggtgaatttcccggcccggggcatcggcgcccgc
agcatcgaggccttgcaggatgccgcacgggccgccggcagtagcctgttcgcggccatt
ccccaggtgccgggcaaggccggcgcctccctggccgccttcgccgccctgatcgagagc
atgcgtccggccctggacctgcccctgccggagctggtggaccatgtggtggagctatcg
ggcctgcgcctccattacctgaacgagaaggaaggccaggagcggctcgccaacctggac
gaactgctcaatgcagccaccagcttcgtcgccgaggaggggcgtgaggtgatggagccc
gaggaggcggaatccacgggagaaccgacgggtgagctgagcgccgacctggcggccttc
ctcacccatgcggccctggaggccggcgagcatcaggccggcgagggggacgacgccctg
caactgatgacggtgcattccgccaagggcctggaattcaacgtggtgttcatgagcggt
ctggaagagggtctgtttccccacgagaattccgtccaggaagccaagggcctggaggag
gaacggcgcctgatgtatgtggcggtgacccgtgcccggcaacggctctacctgtccttc
gcccagacccgcatgctccacggccagacccgctacagcctgccctcccgcttcatcgac
gaaattcccggcgagttgctgaagtggctgacccccaaggcgaagaaggggggctacgct
tacgaggtggccgatgccttcacgccttcgccccgttcccgggtgagcagcgggggtggc
ctgcgggtggggcagaacgtggcccatgccaggttcggccagggggtgatcgtcaatgcc
gaaggcagcggcagcgatgcccgggtacaggtgaatttcggtccggccggcatgaagtgg
ctggccctttccgtggccaaactggaggccctgtga |