Desulfobulbus oligotrophicus: HP555_01545
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Entry
HP555_01545 CDS
T06967
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dog
Desulfobulbus oligotrophicus
Pathway
dog03420
Nucleotide excision repair
dog03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HP555_01545
03430 Mismatch repair
HP555_01545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dog03400
]
HP555_01545
Enzymes [BR:
dog01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HP555_01545
DNA repair and recombination proteins [BR:
dog03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HP555_01545
MMR (mismatch excision repair)
Other MMR factors
HP555_01545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
QQG64636
UniProt:
A0A7T5VB62
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All DBs
Position
complement(339794..340882)
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AA seq
362 aa
AA seq
DB search
MANFIMLAVAGSRKTQGIVEHCASLPHDRRALVLTYTQANQSELRSRLAKYAGDRPNIVV
MGWFTFLLREFARPFLPFMFAGERVCGFNFEGEPHRMAKGRNRFLDAHGCVYRSELGRLA
HELVGASKGALLRRIECIYDEILIDEVQDLSGHDWEIVDVLLSSAAEVRMVGDIRQAVLS
TNPRSGKNKKYAYAEAVNWFREREALGVLSITENTTTWRCHPKIAEFSDTIFDASWSFPC
TKSVNEKVTGHDGVFLLRHAHVGEYLRRFRPQCLRDSANSGKAFDLEYINFRLAKGMTFN
RVLIAPTSGITYFVQTGTYLDPIPAAKLYVAVTRAAQSVAFIIDKPGKSTLPYWEPESGD
QP
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atggctaacttcatcatgctcgcagttgctgggtctcgcaagacgcagggcatcgtcgaa
cactgtgcctcactaccacacgatcgacgtgcactggtcttaacgtacacgcaagccaac
cagtccgaattgcgcagccgtcttgcgaagtacgcgggtgatcgcccaaacattgtcgtc
atgggttggtttacttttctgctgcgcgagtttgcgcggccatttttgccctttatgttc
gccggcgagagggtttgcggctttaactttgaaggcgaaccacaccggatggccaagggt
cgaaatcgttttcttgacgcgcacgggtgtgtctacagatccgagctgggacgcttggcg
catgaattggtcggagccagcaagggcgcgctcttgcgcaggattgagtgtatttacgac
gaaattctcatcgacgaagttcaagacctgagtggccacgattgggaaattgtagatgta
cttctcagctcggcggcggaggtacggatggtcggggatatccgacaggcagtgctctcc
acaaatccacgaagcggcaagaacaaaaagtacgcatatgctgaggccgtgaattggttt
cgggaacgcgaggcgctcggcgtgctgtcgatcaccgagaatacaaccacgtggcgttgc
catcccaagatcgcagagttctctgacacaatcttcgacgccagttggtcatttccatgt
acaaagtcggtgaatgagaaagtaaccgggcatgacggcgtattcctcctccgtcacgca
catgtcggcgagtatttgaggcgattccgtccgcagtgcctgcgggacagtgctaactct
gggaaggctttcgaccttgagtacataaatttccgactcgcgaaggggatgaccttcaat
cgagttttgatcgcaccgacctctggcatcacgtatttcgtgcagaccggcacatacctg
gatccgatcccggcagcgaagttatatgtggcggtgactagggctgcacaaagtgtagcg
ttcattattgacaaaccagggaaatccacgctcccttactgggaacccgagtcgggtgac
caaccatga
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