Desulfobulbus oligotrophicus: HP555_02060
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Entry
HP555_02060 CDS
T06967
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
dog
Desulfobulbus oligotrophicus
Brite
KEGG Orthology (KO) [BR:
dog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dog03019
]
HP555_02060
Messenger RNA biogenesis [BR:
dog03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HP555_02060
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GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Cas3_HD
HD_3
RMI2
Motif
Other DBs
NCBI-ProteinID:
QQG64733
UniProt:
A0A7T6APK0
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Position
complement(452533..453624)
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AA seq
363 aa
AA seq
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MNIQEKKIFISQLTAGQQLQDVFLVAKKSLADTRAGKPYLAMTLMDRTGEIEVRVWENAQ
QYDALIEEGDYALVQAVVKPFRDQLQMTVTSLRKVDETAVDLASFLRTSTRPAAEMHAAL
DAVIGSITDPALQQLLQTIFQGEVLQKFQRAPAAKKLHHAYIGGLMEHTLSIVGMADKVA
DHYPLIDRDMLIAGALVHDLAKIEEFDYSKPAFQYTDRGRLVGHLVMGVDIVRRAAGQVP
AITDDQLDRLLHMILSHHGQYGFGSPVLPMTPEAILLHYLDDMDAKMQYMESLCVKMDGN
SWQWTDYQRHLERYLYLRACGAAQEEGAEQAEDIPDPAASSPAEPVRQPREKSSLAHRQQ
SLF
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgaatattcaggagaaaaaaatctttatcagccagctgaccgccggtcagcagctgcag
gatgtatttctggtggcaaaaaaatcactggctgataccagggccggcaaaccctacctt
gccatgaccctgatggaccggaccggtgagattgaggtcagggtctgggagaacgcgcag
cagtatgacgccctgatcgaagagggtgactatgccctggtgcaggctgtggtcaaaccc
ttccgtgaccagttgcagatgaccgtgacctccctgcggaaggtggatgagacagcggtg
gatctggcatcttttctgcggacaagcacaaggccggcggctgagatgcatgccgctctg
gatgcggtgatcggttccattactgatccggcactgcagcagcttctgcaaaccatcttt
cagggagaggtgctgcagaaatttcaacgggcgccggctgccaaaaagttacaccatgcc
tatatcggcggcttgatggaacataccctgtcgattgtcggcatggcggacaaggtggcg
gaccattatcccctgatcgatcgggacatgctgattgccggagccctggtgcatgacctg
gccaagattgaggagtttgattattccaaaccagcctttcagtacacagaccgggggcgc
ctggtcggtcatctggtcatgggagtggatattgtgcgccgggcagccgggcaggtaccg
gcgatcacagacgatcagctggaccggcttctgcacatgatcctcagtcatcacggccaa
tacggctttggctccccggtgttgcccatgacgccggaagccatcctgctgcattatctt
gacgacatggacgccaagatgcagtacatggaatcattgtgcgtcaagatggacggtaac
agctggcagtggaccgattatcagcggcatctggagcgctatctctaccttcgtgcctgc
ggggcagctcaggaggaaggggcggagcaggcggaagatatccctgatccggcggcctct
tcaccagctgagccggttcgtcagcccagggagaaatcgtcgttggcccatcgccagcag
tctctcttttaa
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