KEGG   Desulfobulbus oligotrophicus: HP555_02060
Entry
HP555_02060       CDS       T06967                                 
Name
(GenBank) HD domain-containing protein
  KO
K03698  3'-5' exoribonuclease [EC:3.1.-.-]
Organism
dog  Desulfobulbus oligotrophicus
Brite
KEGG Orthology (KO) [BR:dog00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dog03019]
    HP555_02060
Messenger RNA biogenesis [BR:dog03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     HP555_02060
SSDB
Motif
Pfam: HD tRNA_anti-codon TraI_2 Cas3_HD HD_3 RMI2
Other DBs
NCBI-ProteinID: QQG64733
UniProt: A0A7T6APK0
LinkDB
Position
complement(452533..453624)
AA seq 363 aa
MNIQEKKIFISQLTAGQQLQDVFLVAKKSLADTRAGKPYLAMTLMDRTGEIEVRVWENAQ
QYDALIEEGDYALVQAVVKPFRDQLQMTVTSLRKVDETAVDLASFLRTSTRPAAEMHAAL
DAVIGSITDPALQQLLQTIFQGEVLQKFQRAPAAKKLHHAYIGGLMEHTLSIVGMADKVA
DHYPLIDRDMLIAGALVHDLAKIEEFDYSKPAFQYTDRGRLVGHLVMGVDIVRRAAGQVP
AITDDQLDRLLHMILSHHGQYGFGSPVLPMTPEAILLHYLDDMDAKMQYMESLCVKMDGN
SWQWTDYQRHLERYLYLRACGAAQEEGAEQAEDIPDPAASSPAEPVRQPREKSSLAHRQQ
SLF
NT seq 1092 nt   +upstreamnt  +downstreamnt
atgaatattcaggagaaaaaaatctttatcagccagctgaccgccggtcagcagctgcag
gatgtatttctggtggcaaaaaaatcactggctgataccagggccggcaaaccctacctt
gccatgaccctgatggaccggaccggtgagattgaggtcagggtctgggagaacgcgcag
cagtatgacgccctgatcgaagagggtgactatgccctggtgcaggctgtggtcaaaccc
ttccgtgaccagttgcagatgaccgtgacctccctgcggaaggtggatgagacagcggtg
gatctggcatcttttctgcggacaagcacaaggccggcggctgagatgcatgccgctctg
gatgcggtgatcggttccattactgatccggcactgcagcagcttctgcaaaccatcttt
cagggagaggtgctgcagaaatttcaacgggcgccggctgccaaaaagttacaccatgcc
tatatcggcggcttgatggaacataccctgtcgattgtcggcatggcggacaaggtggcg
gaccattatcccctgatcgatcgggacatgctgattgccggagccctggtgcatgacctg
gccaagattgaggagtttgattattccaaaccagcctttcagtacacagaccgggggcgc
ctggtcggtcatctggtcatgggagtggatattgtgcgccgggcagccgggcaggtaccg
gcgatcacagacgatcagctggaccggcttctgcacatgatcctcagtcatcacggccaa
tacggctttggctccccggtgttgcccatgacgccggaagccatcctgctgcattatctt
gacgacatggacgccaagatgcagtacatggaatcattgtgcgtcaagatggacggtaac
agctggcagtggaccgattatcagcggcatctggagcgctatctctaccttcgtgcctgc
ggggcagctcaggaggaaggggcggagcaggcggaagatatccctgatccggcggcctct
tcaccagctgagccggttcgtcagcccagggagaaatcgtcgttggcccatcgccagcag
tctctcttttaa

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