KEGG   Desulfobulbus oligotrophicus: HP555_05355
Entry
HP555_05355       CDS       T06967                                 
Symbol
gspD
Name
(GenBank) type II secretion system secretin GspD
  KO
K02453  general secretion pathway protein D
Organism
dog  Desulfobulbus oligotrophicus
Pathway
dog03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:dog00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    HP555_05355 (gspD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:dog02044]
    HP555_05355 (gspD)
Secretion system [BR:dog02044]
 Type II secretion system
  General secretion pathway protein
   HP555_05355 (gspD)
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0 TPR_2 TPR_1 TPR_12 TPR_19 TPR_8 TPR_16 TPR_14 TPR_17 TPR_11 TPR_6 TPR_7 TPR_CcmH_CycH ARM_TT21_5th Npa1 Fis1_TPR_C TPR_NPHP3 TPR_9 HAT_Syf1_CNRKL1_C
Other DBs
NCBI-ProteinID: QQG65332
UniProt: A0A7T6AQ90
LinkDB
Position
1186418..1188667
AA seq 749 aa
MMRTFLIYGFSAALFASCLLCGISPLCAASPKVTQQTGGAQRYVTIDFNDVDINIFIKYI
SELTGKNFVVDREVKGKVTIISPTRISEENAYRVFESVLEVHGFAAVPSGSIIKIVPSVV
ARSKNIATLHDSDMTLDGDDRVVTQIVSLKHANAEEIKNMLIPLVSKTSVIISHAGSGML
ILTDFQSNISRLMEIIRTVDVPADGDEMFIIPLHRTSAESISRAIGQLFTGVQAQKGQRP
EAVKIIPFERTNALIVVAPKELMPRIRALVTKLDEDVPRKDGNLHVIYLQHANAEEMVKV
LTNLPGEALSGKAAPGGASGGGTVAGGAISAEIKIVADTETNALVITGPREEYEAVENLV
KKLDIPRRMVYLEALIMEVKVTKDFAIGVQWADGRGSVVGGFSGRPGSAAYDNLTGMTTD
PGRLPAGFTLGVLDKGIRIGDVTFPNLGAVVNAYKSDDDVNVIATPQILTTDNKKATIKV
GENVPYITSKNTTSGTQQDYTNYEYKDVATSLTITPQVNQAEIVRLEIGVEVIKLKTDSA
VGTPTTFTRTADTTVIIHNEQTVVIGGMIGEDTTQGEYKVPLLGDIPVLGWMFKSKSTSN
EKTNLYIFITPRIVENPAELAELFHKKRETMEKVHRVPGDAADQFLRPVATNPAHSVALS
DIGFAKMQQKDLLRARQYFNQALKIDPDNAAALVNLATLNEMEGKRDEAASLYRQVLELP
PSEGGADNHEAASEDPYKALARAGLNRLQ
NT seq 2250 nt   +upstreamnt  +downstreamnt
atgatgagaacattcttgatctacggtttttctgcggccctatttgcaagctgcctgctg
tgcggcatctctcccctatgtgcagccagccctaaggtgacccaacagaccggaggagcg
cagcgttatgtcacaatcgactttaacgatgttgatataaatatttttataaaatatatc
agcgagctgaccgggaaaaacttcgttgttgaccgtgaggtcaaaggcaaggtgacgatt
atttcaccgacccgtatttcggaagagaatgcttaccgggttttcgaatccgttctggaa
gtccatggctttgccgctgtgcccagcggttccatcattaaaatcgtcccatcagtggtg
gctcgatcaaagaacatcgcgaccttgcacgacagcgatatgactttggatggagacgat
cgcgttgtcacccagatcgtctctctgaaacatgcgaatgccgaagaaataaaaaatatg
ctcatccccctggtgtccaagaccagtgtcattatttctcatgctggttcgggtatgctg
attctcactgatttccagtccaatatctcccgtctgatggagataataaggaccgttgat
gtaccggcggatggcgatgaaatgttcatcattccactgcatcgcacttcggcggaaagc
atttccagggccatcggtcaactgttcaccggggtgcaggcacagaaaggtcaacgtccg
gaagccgtcaagattatcccctttgaacgcacaaatgctttgattgttgtcgctcccaaa
gagttgatgccgcgaattcgtgctcttgtaacgaaactggatgaagatgttcccaggaag
gatgggaatctccatgttatctacctccagcatgccaatgccgaagagatggtcaaggtg
ctgacgaatcttcccggcgaggccctcagcgggaaagcagcgccgggcggggcatccggg
ggaggcactgttgccggaggtgccatctctgcagaaataaagatagtggccgatacggaa
accaacgccctggtcatcaccggtccgcgtgaagagtatgaagctgttgaaaatcttgtc
aagaaactggatattccgcggcggatggtctatctggaggccctgatcatggaggtaaag
gtaaccaaggactttgccattggtgtgcagtgggccgacggcagaggatcggttgtcggc
ggcttcagtggcaggcccggttctgccgcttacgataatcttaccggcatgacaactgat
ccgggacggctgcccgcaggtttcaccttgggggttcttgataagggaatcaggatcggt
gatgtgacttttccaaatctgggcgccgtcgtcaatgcgtataaaagtgacgatgatgtc
aatgttattgccacgccgcagatcctcaccacagacaataaaaaggcaacgatcaaggtg
ggcgagaacgtaccgtacatcaccagcaagaatacaacttccggtacacaacaggattac
accaattacgaatacaaggacgtggccacaagtctgaccatcacccctcaggtgaaccag
gcggaaatcgttcgtctggaaatcggagttgaagtgatcaaactcaagaccgacagtgcc
gtcggcaccccgacgacctttacccggaccgcagataccaccgttatcattcataatgag
cagactgtggtcatcggcggtatgataggcgaggatacgacacaaggcgagtacaaggtg
cctctgctcggagacattccggtcctgggatggatgtttaagtcaaaaagtacaagcaat
gaaaagaccaatctctatatctttataacccctcgtattgttgaaaatccggcagagctt
gccgaattgtttcataagaaaagagaaaccatggaaaaagtgcatcgtgttcccggagat
gcggctgatcagttcctgcggccggtggccaccaatccggcgcacagtgtagctctgtcg
gatatcggctttgcgaagatgcagcaaaaggacctgcttcgcgcccggcagtactttaac
caggcgttgaagattgatcccgataatgcggcggctctggtcaaccttgccaccttgaat
gaaatggagggaaagagagatgaggccgcatcgctgtacaggcaggtgctggagttgccg
ccatcggaaggtggtgcagacaaccacgaggccgcatcggaagatccttataaggccttg
gccagggccggattaaaccgtctgcagtag

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