Desulfobulbus oligotrophicus: HP555_05410
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Entry
HP555_05410 CDS
T06967
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
dog
Desulfobulbus oligotrophicus
Pathway
dog03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HP555_05410 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dog03400
]
HP555_05410 (ruvB)
Enzymes [BR:
dog01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HP555_05410 (ruvB)
DNA repair and recombination proteins [BR:
dog03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HP555_05410 (ruvB)
RecFOR pathway proteins
HP555_05410 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
DUF815
AAA_3
nSTAND3
NB-ARC
RNA_helicase
Torsin
TsaE
AAA_14
AAA_33
Motif
Other DBs
NCBI-ProteinID:
QQG66956
UniProt:
A0A7T5VFM9
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All DBs
Position
1199305..1200351
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AA seq
348 aa
AA seq
DB search
MSNRLVSGDSLQEDLQLGVDIRPRRLDEYIGQDQVKKNLQVFIQAALQRREALDHVLFHG
FPGLGKTTLAYIIANEMGAGIKVTSGPVIERPGDLAAILTGLQVGDVLFIDEIHRLNHVV
EEILYPAMEDFQLDLVIGQGPGARSVKMDLPPFTLVGATTRAGLLTPPLRDRFGVMLRLD
YYSPEQLVTIIQRAARVFNIKIDDDGAMELGRRSRGTPRIANRLLRRVRDFSEVGGHAVI
SREVADQALRMLNVDPLGLDEMDRKILLTLMEKFQGGPIGLETLSTAVCEEKNTLEDVYE
PFLIQSGFLMRTPRGRVATPLAYEHFGLPVRVNTQQQPGLFDDPEENL
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atcagtaaccggttggtaagcggcgactccctgcaggaagatctgcagttgggtgtcgac
attcgaccgaggcgtttagacgagtatatcggtcaggatcaggtgaaaaaaaatctgcag
gtttttattcaggcagctctccagcgtcgtgaagcacttgatcatgtgttgtttcatggt
ttccccggtcttggcaaaaccacgttggcttacatcattgccaacgagatgggggcaggt
atcaaggtgacctcgggcccggtgattgaacgacctggggatcttgccgctatccttacc
ggcctgcaggtcggtgatgttcttttcatcgacgaaattcaccgtcttaaccatgtggtt
gaggagatcctttacccggccatggaagattttcagcttgacctggtgattggtcaggga
ccgggagccagatctgtcaagatggatctgccgcctttcacgcttgtgggggctacaacc
agagccggtttgttgacgccgccgcttcgtgatcgattcggtgtcatgttgcgacttgat
tactattcaccggagcagctggttacgataatacagcgtgccgcccgcgtctttaacata
aaaattgatgacgatggcgccatggaactggggcgccgttcccgtggaacgccacgaatt
gccaatcgattgctgcgccgggttcgtgatttttccgaggttggtggacatgccgtaatt
tcgcgggaggtcgctgatcaggctttgcgtatgctcaatgttgatccgcttggacttgat
gagatggatcgtaaaatcttgctgacactgatggagaaattccagggcggacccattggt
ctggagaccctgtcaaccgctgtgtgtgaagaaaaaaacaccctggaagacgtgtatgaa
ccttttctcatccaatcaggctttctgatgcgcactccccgtggacgtgtggcaactccc
cttgcctacgaacattttggtctcccggttcgtgtcaatacacagcaacaacctggtctg
tttgacgatcctgaagaaaatttatga
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