Desulfobulbus oligotrophicus: HP555_05445
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Entry
HP555_05445 CDS
T06967
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
dog
Desulfobulbus oligotrophicus
Pathway
dog00470
D-Amino acid metabolism
dog00550
Peptidoglycan biosynthesis
dog01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dog00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HP555_05445 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HP555_05445 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dog01011
]
HP555_05445 (murD)
Enzymes [BR:
dog01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
HP555_05445 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
dog01011
]
Precursor biosynthesis
Amino acid ligase
HP555_05445 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
PGK
FAD_binding_3
AlaDh_PNT_C
XdhC_C
2-Hacid_dh_C
Glu_dehyd_C
Motif
Other DBs
NCBI-ProteinID:
QQG65349
UniProt:
A0A7T5VCP2
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All DBs
Position
1208446..1209831
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AA seq
461 aa
AA seq
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MDIQPGTQALIIGLGAAGLSTVRYLTAMGVRVKVSDQRKIDQIEPATIDLLRSAGIALET
GGHSLDQLTGMDVVIPGPGVPLDVPVLQAARKQGLPVLGELALAAGRFSSPVIAITGSNG
KTTVTGLLGHLLQAAGKHPFVGGNIGTPLLDYFAAPEAYDVVVLELSSFQLDLAGAFRPD
TALLLNISPDHLDRHGSLAAYRSTKMRIFANQIQGDTAILGADDPVVAHACICSGVNRYM
FGRDPVCAARIVDDNILLRLEQNGNSRQEEYRLSRTNLFSSVNQLNAAAALLAAAVHGCR
YEDLARGLATFIPPPHRMAEVAVIDDVRFINDSKATNIGALAAALNSCPAPVVLIAGGRD
KASDFTLLKETVARRVKRLILIGEAADAMEAALGSAVGTERAKTMEDAVRRAKAVAGSGD
IVLLAPGCASFDMFSGYAERGTVYEQHVLRLSRECGVNVCG
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggatatccaaccagggacacaggcattgatcatcggcttgggagcagcagggctgtca
acggtgcgctatctgacagccatgggtgtccgggtgaaggtttccgatcaacgcaagatt
gatcagattgagcccgcaaccatcgacctgctgcggtcggcagggattgccctggaaacc
ggcgggcacagtcttgatcagctcaccggcatggatgtggtcatccccgggccgggcgtt
ccgcttgatgtgcccgtgctgcaggctgcccgcaaacaaggtctccccgttcttggtgaa
ctggcgctggcagccggtcggttttccagcccggtaatcgcgattaccggttccaacggg
aagacaactgtcaccggtctgctcggtcatctgttgcaggctgcaggcaaacatcccttt
gttggtggcaatattggtacaccgctgctcgactactttgcagccccggaagcgtatgac
gtggtggttcttgaactgtcgagcttccagctcgatctggctggtgcgttccgaccggac
acagccctcttgctgaacatctcacctgatcatcttgaccggcacggatcactggcagca
tacaggagtaccaagatgcggatctttgccaaccagatccagggagatacggcgattctc
ggtgctgacgatccggtggttgcacatgcctgtatctgttccggggttaaccggtacatg
tttggccgggatccggtgtgcgcggcgagaattgttgatgacaatatcctgctgcgcctt
gagcagaacggcaactctcgtcaagaagagtaccgtctcagccggacaaacctgttttct
tcggtcaatcagttgaatgccgcggcagcgcttttggcggcagctgtgcatggctgccgg
tacgaagatcttgcccggggtttggccacgttcataccgcctccacaccggatggccgag
gtggctgttatcgatgatgtccgttttattaacgattccaaggcaacgaatatcggggca
ttggcagcggctttgaacagttgtccggctccggttgtcctcattgccggcgggcgtgac
aaggccagtgatttcaccctgttaaaggaaacagtggctcgcagggtgaagcgtctgatc
ctgatcggtgaagcagcagatgcaatggaggccgctttgggatcagccgttggcacagaa
cgggcaaaaaccatggaagatgctgtccgccgggcaaaagccgttgccggcagtggcgac
attgtcttgcttgctcctggttgtgcaagtttcgatatgttttccgggtatgccgaaagg
gggacggtctatgaacaacatgtgctgcgactttcccgggaatgtggagtcaacgtatgc
ggctga
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