Desulfobulbus oligotrophicus: HP555_07695
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Entry
HP555_07695 CDS
T06967
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
dog
Desulfobulbus oligotrophicus
Pathway
dog03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dog00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HP555_07695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dog03021
]
HP555_07695
03400 DNA repair and recombination proteins [BR:
dog03400
]
HP555_07695
Enzymes [BR:
dog01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HP555_07695
Transcription machinery [BR:
dog03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HP555_07695
DNA repair and recombination proteins [BR:
dog03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HP555_07695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF211
RNA_pol_L_2
AMIN-like
Motif
Other DBs
NCBI-ProteinID:
QQG65751
UniProt:
A0A7T6AQH2
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All DBs
Position
1698943..1699983
Genome browser
AA seq
346 aa
AA seq
DB search
MEQHMRDDNPFYNNWHMLIAPEKIEVDEKSLTSCFGKFVCQPLERGFAVTIGNSLRRIML
SSIRGAAITSVRLDNAMHEFTTIDGVHEDVSEIILNLKQIRLQLLGPEARIVSIEKVGPG
PVVAGDIAGSGYVEVLNPAQKICTVTGDTTFRAELEVQWGKGYVAAEMNKQEGQPIGVIP
IDSAFSPIVRVQYDVSQARVGQQTDYDRLTMEIETDGSVQPQDALAYAAKILKEQMTIFI
NFNEEDVKAPVDLEKGKDEKSYPPFLDKNVEDLELSVRSANCLKNAQIQYIGQLVAKTDA
EMLKTKNFGRKSLNEIKTLLAEHNLTLGMKFDDWTPPEKREEIVEE
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggaacaacacatgcgggatgataatcctttttataataactggcacatgctcatcgcc
cccgagaaaatcgaggtcgatgaaaaatcacttacctcctgttttgggaaatttgtctgc
cagccgcttgagagaggttttgctgtcacgattggtaactcactgcgtcggataatgctc
tcttccatacgtggagcagccatcacttcggtacgtcttgacaatgcgatgcacgagttt
accacgattgatggggtccatgaggatgtctctgaaatcattctcaacctaaagcagata
cgcttacagttgcttggccctgaagcgcgtattgtctccattgaaaaggtgggcccaggc
ccggttgtagccggggatattgcaggcagcggatatgttgaggtgttaaatcccgcacaa
aaaatctgtacagtaaccggggataccacttttcgagcggagcttgaagtgcaatggggt
aaggggtatgtagctgctgagatgaataagcaagaagggcagcccataggtgtaatacct
atagattccgctttttcacctattgtacgtgtccaatatgatgtaagtcaggcacgtgtc
ggacagcagaccgactatgatcgtttaacaatggaaatcgagaccgatggcagtgttcag
ccgcaagacgctttggcatatgcagctaaaatactgaaagaacagatgaccatctttatt
aattttaatgaagaggatgttaaagccccggtcgacctggaaaagggaaaagatgaaaaa
tcttatccgccgtttctcgataaaaatgtggaagatcttgagctttcagtccgttcagca
aattgtttgaaaaatgcccagattcagtacattgggcaattggtagcaaaaacagatgcc
gaaatgctgaagaccaaaaactttggtcgtaaatctctcaatgagataaaaacgttgctt
gcagagcataatctgactttgggcatgaagtttgacgattggactccgcctgagaagcga
gaggagatcgtcgaagagtaa
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