Desulfobulbus oligotrophicus: HP555_11610
Help
Entry
HP555_11610 CDS
T06967
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dog
Desulfobulbus oligotrophicus
Pathway
dog03420
Nucleotide excision repair
dog03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HP555_11610
03430 Mismatch repair
HP555_11610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dog03400
]
HP555_11610
Enzymes [BR:
dog01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HP555_11610
DNA repair and recombination proteins [BR:
dog03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HP555_11610
MMR (mismatch excision repair)
Other MMR factors
HP555_11610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
QQG66466
UniProt:
A0A7T5VET0
LinkDB
All DBs
Position
2523149..2525335
Genome browser
AA seq
728 aa
AA seq
DB search
MRVQSSFPENQSAESITEPAPLNLAQQIAVSHGDGPILVIAGAGSGKTRTLVYRMAHLIE
RGVEPESVLLLTFTRRAAQEMLQRAGELTAGSCRRVMGGTFHATANILLRRYGHLLNLGP
NFTIIDRGDAEGIINLLKSSLGMGGAGKRFPSKRVVMNLISGAVNKSSSIEQLVYEDHLH
LTEFLNDFYTIADHYRQFKRDHGLLDYDDLLVYWKQLLVESENARVELSSRFQHILVDEY
QDTNLLQAEIVRLLAYCHQNVMVVGDDAQSIYSFRGADFANIMRFPEQFPGTRIVKLEEN
YRSTEPILQLTNAIIANAEKKFTKTLFTEKVGGVRPQLAAAPNEAAEARFIVQEIQKHHQ
NGTPLTDIAVLFRSGFHSFKLEIELAAHGFDFEKRGGLRLTESAHIKDVLSFLRVIINPW
DNLSWNRILLQLEKVGPKTVQKILNSVRQADNPLTALTAYRPAPTWRLQFEKLVDMLGRL
HQPDLTPSDQYDLVMEYYSPIFEKIYYDDYPKRRRELEQIKALISGYGDLQSFIDDTALD
PPEVGADAEGIRSEQRLTLSTIHSAKGLEWDTVFVMGLAEGRFPHQHATPGEQWEEERRL
LYVATTRAKKELFLTYPKEMLGSDRQLLRASLTPFLREVSPGLYTNIDQVSARTPLQTGQ
YQQTTSQLRHPNVQSARITYQEGMRVTHAFFGHGRVVSIPGPRRIEILFDRHGSKILHLD
YAKLEILD
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgttcaatcttcttttccagagaaccagtcggcagaatccatcacagaaccggca
ccactcaaccttgctcaacagatcgcggtgagccacggtgacggtcctatactggtgata
gccggcgccggttccggcaaaacccgaaccctggtgtaccggatggcccacctcattgaa
agaggtgtggaaccggaatctgttctgctcttaacgttcacccggcgggccgcccaggag
atgctgcagcgggccggagaactcacggcaggatcatgccggcgggtcatggggggaacc
ttccacgccactgccaatattctgctgcgccgatacggtcatctcctgaacctcggcccg
aacttcaccattattgaccgtggcgatgcggaaggcatcatcaacctgctcaagtcttca
ttgggcatgggcggtgccggtaaacggtttccatccaaacgggtggtgatgaatctgatc
tccggggctgtcaacaagtcctccagtattgaacagctggtctatgaagaccatctccac
ctcaccgaatttctgaacgatttttacacgattgccgatcactaccgccagttcaaacgt
gatcacggcctattggactacgatgatctgctggtgtactggaaacagctgctggttgaa
tcggaaaacgccagggtggaactgtccagccggtttcagcacattctggttgacgagtat
caggatacaaacctgctgcaggccgaaattgttcgcctgctcgcctactgtcatcagaac
gtcatggtggtcggcgatgatgcccagtctatctacagcttccgtggagcggattttgcc
aatatcatgcgctttcctgagcagtttcccggcaccagaatcgtgaaactcgaagaaaac
tatcgctccaccgaaccgatcctgcagctgaccaatgccatcattgccaatgcagaaaaa
aaattcaccaaaaccctgttcaccgaaaaggtcggaggagtgcgaccgcagctggctgca
gcacccaatgaggccgcagaagcccgctttattgtccaggagattcagaaacaccaccag
aatggcacccccctgaccgacatcgccgtcctgttccgttccggatttcattcgttcaag
ctggaaatcgaactggcggcccatggttttgactttgaaaaacgtggtggtctccgactg
acggaatccgcccacattaaggatgtgctttcctttttacgggtcatcatcaacccctgg
gacaacctcagctggaaccgtatacttctccagctggaaaaggtcggccccaagaccgta
caaaagattctcaacagtgtccggcaggcggacaatcccttgacagccctgaccgcctat
cggcccgcaccaacctggcgcctgcagttcgagaaactggtggacatgctcggccgcctg
caccagccggatttaaccccatcggatcagtacgatctggtcatggagtactattcgccg
atctttgaaaagatctactatgacgactatcccaaacgccgccgggaacttgagcagatc
aaggctctgatcagcggttatggtgatctgcagtcctttatcgatgacaccgcgcttgat
ccccctgaagttggagcagatgcagaaggaatccgctcggaacagagattgaccctgtcc
accatccattcagccaaaggactggaatgggatacggtctttgtcatggggttggccgaa
ggacgttttccccaccagcatgccacgcccggcgagcagtgggaggaagaacgacgcctg
ctgtacgttgcgacaacccgtgctaaaaaagagctttttctcacctatcccaaggagatg
ctcggatcagaccgccagctgctgcgcgcatcgctcaccccctttctgcgggaagtcagc
cccggactgtacacaaatatcgatcaggtcagtgcacgtacaccgctgcagaccggtcag
taccagcaaacaacgtcgcagcttcggcatccgaacgttcaatcagccagaataacctac
caggaggggatgcgggtcacccatgccttcttcggccatggccgggtggtctcgattcca
ggcccccgtcgcattgaaatcctctttgatcgccacggcagtaaaattcttcatcttgac
tacgccaaacttgaaatccttgactga
DBGET
integrated database retrieval system
