Desulfobulbus oligotrophicus: HP555_13330
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Entry
HP555_13330 CDS
T06967
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
dog
Desulfobulbus oligotrophicus
Brite
KEGG Orthology (KO) [BR:
dog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dog03400
]
HP555_13330
DNA repair and recombination proteins [BR:
dog03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HP555_13330
Archaeal homologous recombinant proteins
HP555_13330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_22
ABC_tran
AAA_21
Motif
Other DBs
NCBI-ProteinID:
QQG66774
UniProt:
A0A7T5VFD4
LinkDB
All DBs
Position
complement(2936884..2940150)
Genome browser
AA seq
1088 aa
AA seq
DB search
MRILQIRFKNLNSLFGEWEIDLTHPAYTADGIFAITGPTGAGKSTVLDAVCLALYGRTPR
LNRVTKSTNEIMSRRTGECFAEVTFETQAGRFRSHWSQHRARRSPDGELQAPKHEIAHAD
TGAIVESKIREVAEQIESATGMDFDRFTRSMLLAQGGFAAFLQAAPDDRAPILEQITGTT
IYSRISVRVHEQKQQAREKLAVLEAETAGIVVLTSEQEQEVGQTLEIKKKEAQERTARVA
VAEKGIAWLNIIDALQKERIDLINEANRLHKESAAFQPERDRLNQAMQAALLDGTYARLI
AVRKQQADDQGKLAREEKMLPQLEAAVTHQAREHKAAEQQTMRVKEELKKAAPVLQRVRL
LDQRLADQQQTVAEGEEECRQDALKIEASRQALAQEQHKRIHTEQQLQQADQYLSEHAQD
EWLISGLTGVEEQLQTLCAQQQEFVQKERDYEQAVNKQKEAITLLAGYQKHICGHKKVLE
KAVQALQQGRDSLRQMLGDRQLREYRTEKDGLLREMAYVARISELEEYRARLEDGRACPL
CGALEHPFAKGNVPAVHELEEQITALTRLINKAEDQETVIRKLEKAEGLARERLAEAEKL
ESAAVHAQKTAATTCAVAKESLEKLCTAVAASRQIVAGKLQPLGIPDIGQYDVATLVEIL
RARLHAWLDKVKQKDKLARLLVDSTGAIKQLDAIVEAQDAALIEKTKRLEVLKTALTSSS
DERKALYGTTDPDAEERRLSRGVADAERAEKLARERYSAVQQQQTAVLAHIESLQKNINQ
RGGELHKHEVEFLAELRSAGFTHEAQVVEAMLPAVRRAELSAQAKKLDDRQTDLNARQED
REKRLAREMSRQVTDKSLQELELQRTRCEALLKESRDAIAGLEHRLKEHAVAKERIQERR
AMIAAQKKDCRRWENLHELIGSADGKKYRNFAQGLTFDIMIGYANRQLQKMSDRYLLIRN
EKQPLDLDVIDTYQASEVRSTRNLSGGESFIVSLALALGLSQMAGKNVRVDSLFLDEGFG
TLDEEVLDTALEALSGLQQDGKLIGVISHVAALKDRISTQIQISPRTGGQSQIQGPGCQR
IASGSVGS
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atgagaatactgcagatacgtttcaaaaatctcaattcactgttcggtgaatgggagata
gatctgacgcatcccgcctatacagccgacgggatctttgccatcaccggccctacgggg
gccggtaagagtacggtccttgatgctgtctgtcttgcgctgtacgggcggactccccgc
ctgaacagggtcaccaaaagcacaaatgagatcatgtcccgccggaccggtgagtgtttt
gccgaggtgactttcgaaacgcaggccggacgttttcgcagccattggagccagcaccgg
gcacggagaagtccggatggtgagcttcaggctccgaaacatgaaatcgcccatgctgat
acaggtgcaattgttgagtcaaagataagagaggtggcggaacagattgaatcggcaaca
ggtatggattttgaccgtttcacccgatccatgctgttggcccagggcggttttgccgca
tttctccaggctgcacctgatgatcgggcgccgatcctggaacagataacaggcacgaca
atctacagccggatatctgtgcgggttcatgaacaaaagcagcaggcacgggagaagttg
gctgttcttgaagcagagacagcgggaatcgttgtgttaacttctgaacaggaacaggag
gtagggcagacgcttgaaataaagaagaaagaggctcaggaacgcacggccagggttgcg
gtggcagaaaaaggtatcgcctggctcaacatcatcgatgccctgcaaaaagaacgtatt
gatctgatcaatgaggcaaacaggctgcacaaggagagtgccgcctttcagccggagcgc
gacaggcttaatcaggcaatgcaggcagccttgctcgatggtacctatgcacggttgatc
gctgtccgcaaacagcaggcagacgatcaggggaagctggccagagaggaaaagatgctt
ccacaactggaagccgctgtcacgcatcaggcccgggaacacaaggcagcagagcagcag
accatgcgtgtcaaagaggagctgaaaaaagctgcacctgtactgcaaagggtccgcctc
cttgatcagaggcttgctgatcaacagcagactgttgcagaaggtgaagaggagtgcagg
caggatgcgctgaaaatcgaggctagcaggcaggcccttgcccaggagcagcacaaacgt
atccatactgaacaacaactgcagcaggcagatcaatacctcagcgagcatgcacaggat
gagtggttgatcagtgggctgaccggtgttgaagaacagctgcaaactttatgtgcacag
cagcaggagtttgttcaaaaagaacgcgattatgaacaggcggtgaacaagcagaaagag
gcaatcacgttacttgccggatatcaaaagcatatttgcggccacaagaaagtgctggaa
aaagccgtgcaagcgttgcagcagggcagggatagcctccggcagatgttgggagatcga
cagctgcgtgaatatcgtactgaaaaggatggcctgcttcgcgagatggcctatgtggca
cggataagcgagcttgaagagtaccgggccaggttggaagatggcagagcctgcccgttg
tgcggtgcgctggaacatccgtttgccaaggggaatgttccagctgttcatgagcttgaa
gagcagattacagcgttgacccggctgatcaataaggctgaggatcaggagactgtcatc
agaaaacttgaaaaagctgaaggtctggctcgggagaggttggcagaagctgaaaagctt
gagtcagcagctgtccatgcgcaaaagaccgctgcaacaacatgtgccgtggcaaaggag
agcctggaaaaactctgtactgctgttgccgcatcccgacagattgtggcgggtaaactg
cagccgctgggtatccctgatatcggtcaatacgacgttgcaacacttgtggagatactt
cgggcacggctgcatgcctggctggataaggtgaaacaaaaagataaactcgcaaggctg
cttgtcgatagcactggtgcaatcaagcagttagatgcaattgttgaagctcaggatgca
gccctgattgaaaaaacaaagcgtctggaggtattaaagacagcattgaccagcagcagt
gatgagcgcaaagcactgtacggcacgacagatcctgatgctgaggaaaggcgtctcagc
aggggtgtggctgatgctgaaagagctgagaagctggccagggagcgatacagtgcggtg
cagcagcagcaaacggctgtactggcacatattgaatctttgcaaaaaaacatcaaccag
cgtgggggggagctgcacaaacacgaagtggaatttcttgctgagctccgatctgcaggt
tttacccatgaagcgcaggttgtcgaggcaatgcttcctgctgtcaggcgggcggaactg
tctgcacaggcaaagaagctcgacgatcgacagaccgacctcaacgcccggcaggaggac
cgggaaaagcgattagccagggagatgagtcgacaggtaactgataaatctttgcaggaa
cttgagctgcaacgtacacgctgtgaagcattgctcaaagagtcgcgagatgccattgcc
ggtcttgaacacaggttgaaagagcatgccgttgcaaaggagcggatacaggagaggcgg
gcaatgatagcggcccagaaaaaagactgtcgccggtgggagaacctgcacgagttaatc
ggttcggctgacgggaaaaaatatcggaactttgcccaagggctgacctttgacatcatg
atcggatacgccaacaggcaactgcagaaaatgagcgatcgctacctgctgattcgcaat
gaaaaacaaccgcttgatcttgatgtgatcgatacctatcaggcaagcgaggtccggtcc
accagaaatctttccggtggcgagagttttatcgtcagcctggcgctcgcactgggcctg
tctcagatggccggcaaaaatgtccgggtggattcactgtttctggatgaagggttcggc
accctggatgaagaggttttggatacggcgctggaggctctttcgggcctgcagcaggac
ggtaaactgatcggtgtcatatcgcatgttgccgccctcaaagaccggatcagtacgcag
atacagatctctccccgaaccggtgggcaaagtcagatacaaggtcccggctgtcagcgg
atcgcatcgggttctgtggggtcttga
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