Desulfobulbus oligotrophicus: HP555_13335
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Entry
HP555_13335 CDS
T06967
Name
(GenBank) exonuclease SbcCD subunit D C-terminal domain-containing protein
KO
K03547
DNA repair protein SbcD/Mre11
Organism
dog
Desulfobulbus oligotrophicus
Brite
KEGG Orthology (KO) [BR:
dog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dog03400
]
HP555_13335
DNA repair and recombination proteins [BR:
dog03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HP555_13335
Archaeal homologous recombinant proteins
HP555_13335
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
SPC25_C
WHD_MalT
Motif
Other DBs
NCBI-ProteinID:
QQG66775
UniProt:
A0A7T5VF46
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Position
complement(2940162..2941391)
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AA seq
409 aa
AA seq
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MNILHTSDWHIGRSLYGKKRYAEFDAFLTWLLTTIQDHSIRVLLVAGDIFDSSTPSNRAQ
SLYYSFLYRVAASSCRHVVIIAGNHDSPSFLNAPKELLKALDIHVIGNITDDPEDEVLVL
YDDQDVPELLVCAVPYLRDRDIRVAEAGESIEDKEQKLLDGLHRQYAAVAAAALQKRRQL
GADIPIVGMGHLFTSGGKTVDGDGVRELYIGSLAHVTARIFPPCFTYVALGHLHVPQMVG
GLETIRYSGSPLPMGFGEAQHQKSVCRVACNGSAVSVQLIDVPVLQKLEQIRGDWSTIQS
RIMQLVAADSRAWLEVIYEGDEVIGDLRERLQRAVAGTEMGILRIKNTRVFEQVLRQTAA
QETLDDLNAEEVFVRCLEMHGVAEEQRPELLRTYRETLLSLAEDDVQAE
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
gtgaatattcttcatacatcggactggcatatcgggcggagtctgtacggcaaaaaacgc
tatgcagagttcgatgcctttttgacctggctgcttaccacaatccaggaccattcgatc
agggtgctgctggtggccggggatatctttgacagcagcacaccgagtaatcgagcccag
agcctctactacagttttctgtacagggtggcagcctcttcctgtcggcatgtggttatc
attgccggtaatcatgactcgccgtcttttctcaatgcgcccaaagaactgctcaaagct
cttgatattcatgtgatcggcaacattaccgatgatcctgaagacgaggtcctggttctc
tatgatgaccaggatgttcccgagctgctggtctgcgctgtgccctatcttcgggaccgt
gatattcgcgttgccgaggcaggggagagcatcgaagacaaggaacagaagctgcttgat
ggtcttcatcgtcagtatgccgcagttgctgccgcagccctgcaaaaacgccggcaactg
ggagccgacatccccattgtcggcatgggacatctgtttaccagcggaggaaaaactgtc
gacggagatggtgtgcgtgaactgtacatcggttccctggcccatgtcactgcccggatc
tttccaccctgttttacctatgtggcgctgggacatctccatgttccgcagatggtaggc
ggtcttgagaccatcaggtacagcgggtctcccttgcccatggggtttggagaggcacag
caccagaagagtgtttgccgggttgcctgtaacggttcagccgtatctgtgcagttaatc
gatgtaccggtgttgcagaagctcgaacagatcaggggcgactggagtactatacagagc
cgcattatgcaacttgtggccgctgattctcgtgcctggctggaagtgatctacgagggg
gatgaggtcatcggtgatctgcgtgagcgtttgcaaagagctgttgccggtacggaaatg
gggattttgcggatcaagaatacccgtgttttcgagcaggtactgcggcagactgctgca
caggagacccttgacgacctgaacgccgaggaggtgtttgtgcgctgccttgagatgcat
ggagtggcggaagagcagcgtccggaactgttgcgcacttaccgggaaacgcttctgtca
cttgctgaagacgatgtacaggctgaatag
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