Desulfobulbus oligotrophicus: HP555_13900
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Entry
HP555_13900 CDS
T06967
Name
(GenBank) TIGR03960 family B12-binding radical SAM protein
Organism
dog
Desulfobulbus oligotrophicus
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM_N2
DUF2344
Radical_SAM
Integrin_beta
Motif
Other DBs
NCBI-ProteinID:
QQG66879
UniProt:
A0A7T5VFK4
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Position
complement(3075816..3078359)
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AA seq
847 aa
AA seq
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MHSSDILDLDTILPLVHKPGQYIGGELHATCRDIDAGCLNFCLIFPDLYEIGMSHQGLQI
LYHILNAHDQYRAHRAYVPDVDMEEQLRIHGMPLFALESKRSLAAYDVLGITLPHELCYS
NILTVLALAGIPWRSEARNDTHPLILGGGACALNPEPVADFFDAIVLGDGEEIILELAGI
LLLAKQEQWDRSAVLNRLSGVTGVYVPSFFAPRYQGDRLVDIQSRKNEYGVVRKRVLSQL
QTASYLQHPLVPVVKPVHDRLGVEIARGCTRGCRFCQAGMTYRPVRERTLEEIMELAEQG
IAHSGFEELALLSLSTGDFSCLGELMGVLMDRFANERVAVSMPSMRVGTLTPEIMEQIKR
VRKTGFTIAPEAGTERLRQVINKGITEEDLLTTCCDAFALGWKLIKLYFMVGLPTETEED
LEGIVHLAKKARAQAGSGKGRPVQMNLGVGTFVPKPHTPFQWEEQISLEESQRRINRLKE
MVPRHGFKIKWHDPEQSFLEGVFARGDRRLSTLIERAWLDGARLDSWSEHFDLERWRKAA
AACGLQLESYLRRRELTDILPWDHLHSGVDRLFLEKELARALQQQYTPDCRNNACQGCGL
CDFKTVRPIVHERLVSLPQAEARTTEKQPNRPPVKGYVYRVHYSRLGQSRYYGHLELLQL
VFRTLQRAGLPLKFSSGFNPTPRVSFSQALPVGVESQAEYFDMELSQPLTSIDATAALLN
RQLPETIRVVSIAVAPRTVAMRSVTSYVVHSDAFPEDLSDRIEDFLNCTTFSVERFRKNR
RQKVDLRSLVTGLSVHNGFLQLEISGEQGKPGTNPREVLMKILNLDEQSALLARIMKTSV
SESTSSS
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgcattcttccgatatccttgatcttgataccatcctgcctttagtccacaagccgggt
caatatattggcggtgagttgcatgccacctgtcgtgatatagacgccggttgcctcaat
ttctgtctgatttttccggatctttatgaaataggcatgtcccaccaggggttgcagatc
ctctatcatatccttaatgcacacgatcagtacagagcacatcgggcctatgtgccggat
gtggatatggaagagcagctacgcattcatggcatgccactttttgcccttgaaagcaag
agaagtttggcggcgtacgatgtgctgggcatcacgttgccccatgagttgtgttacagc
aatatcttgactgtacttgcgttggccggaatcccatggcgttctgaggctcggaatgat
acccatccgttgatccttggtggcggtgcctgtgccctgaatcctgaacctgttgctgat
ttttttgatgccattgtccttggagatggtgaagagataatcctcgaacttgccgggata
ctgttgcttgccaaacaggaacagtgggacagatcagccgtgctcaaccggttgtcgggc
gttaccggtgtctatgtgccttccttttttgcaccccggtatcagggtgatcgactggtt
gatatacaatcgcgcaaaaatgaatacggggtggtgcgcaaacgggtgctctcgcagctg
cagacagcatcctacctgcaacatcctctggtaccggtggtcaaaccggtccatgatcga
cttggggtggagatcgcccggggctgtacccggggctgtcggttttgtcaggccggcatg
acctatcggccggttcgggaacgaacacttgaagagatcatggagttggcggagcaggga
attgctcactcaggttttgaggaactggcgcttctgtccttatccaccggtgatttttca
tgtctgggcgaattgatgggcgttttgatggatcgctttgccaatgaacgtgttgctgta
tccatgccgtcaatgcgtgtcggaacgttgactccggagatcatggagcagatcaagcgg
gtgagaaagacaggttttaccattgcaccggaggccggcaccgaacggttacgacaggtt
atcaataaggggataaccgaagaagacctgctgaccacctgttgcgatgcctttgctcta
gggtggaagttgatcaagctctactttatggtgggtctgcccacggaaaccgaagaggat
ctcgagggtattgttcaccttgcgaaaaaagcacgggcacaggccgggtcggggaaaggc
aggcccgtgcagatgaaccttggcgtgggtacctttgttcccaaaccgcatacacccttt
cagtgggaggaacagatcagtctggaggaatcacagcgacggatcaatcgattgaaggag
atggtgccgaggcatgggtttaagataaaatggcatgatcctgagcagtcgtttctggag
ggcgtttttgccaggggtgaccggagactgtccaccctgattgagcgggcctggctggat
ggtgcccgtcttgacagctggtccgaacactttgatctggagcggtggcgaaaagctgcg
gcagcctgtggactgcaactggaaagctaccttcggcgtcgtgagctgacggatatctta
ccctgggaccatctgcacagtggggttgatcgtctcttcctggaaaaagagctggccaga
gccctgcagcaacagtacacgccggactgtcggaataacgcctgtcagggatgcgggctc
tgcgattttaagactgtacgtccgattgtccacgaacggttggtcagtctgccccaggca
gaggcgaggaccactgaaaagcaacccaacagaccgccggtaaaaggatatgtttaccgt
gtccattactcccgtttagggcagagccggtattacggtcatcttgagcttttacagctg
gtgtttcgcacactgcagcgcgccgggttaccgcttaaattttccagtggttttaacccg
acgcctcgtgtttctttcagccaggcactgcccgttggtgtggagagtcaagcggaatac
tttgatatggaactgtctcaacccctgacctctatagatgctaccgctgcacttcttaac
aggcagcttcctgagaccattcgagtcgtatcgattgctgttgctccccgcacggtggcc
atgcgctctgtcaccagttacgttgtgcacagcgatgctttcccggaggacctttctgac
agaatcgaggattttctcaactgtacaaccttctctgttgaacggtttcgtaagaacaga
cggcagaaagtagacctgcgctctttggtgaccgggttgagcgtgcacaatggattcctg
cagcttgaaatatccggtgagcagggaaagcccggaaccaatccacgggaagttttgatg
aagatcctgaatcttgatgaacaatcggcattgcttgcccggataatgaaaacctcggtc
tctgaaagtacatcctcatcttga
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