Dokdonia sp. MED134: MED134_01135
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Entry
MED134_01135 CDS
T03275
Name
(GenBank) TCP-1/cpn60 chaperonin family protein
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
dok
Dokdonia sp. MED134
Pathway
dok03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dok00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MED134_01135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dok03019
]
MED134_01135
03110 Chaperones and folding catalysts [BR:
dok03110
]
MED134_01135
03029 Mitochondrial biogenesis [BR:
dok03029
]
MED134_01135
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dok04147
]
MED134_01135
Enzymes [BR:
dok01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
MED134_01135
Messenger RNA biogenesis [BR:
dok03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
MED134_01135
Chaperones and folding catalysts [BR:
dok03110
]
Heat shock proteins
HSP60 / Chaperonin
MED134_01135
Mitochondrial biogenesis [BR:
dok03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
MED134_01135
Exosome [BR:
dok04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MED134_01135
Exosomal proteins of other body fluids (saliva and urine)
MED134_01135
Exosomal proteins of breast cancer cells
MED134_01135
Exosomal proteins of colorectal cancer cells
MED134_01135
Exosomal proteins of bladder cancer cells
MED134_01135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Pho88
Phage_connect_1
NNH2
Motif
Other DBs
NCBI-ProteinID:
EAQ39180
LinkDB
All DBs
Position
1374938..1376572
Genome browser
AA seq
544 aa
AA seq
DB search
MAKDIQFNIEARDGLKRGVDKLANAVKVTLGPKGRNVIISKSFGAPHVTKDGVTVAKEIE
LEDALENMGAQMVKEVASKTNDLAGDGTTTATVLAQAIVTEGLKNVAAGANPMDLKRGID
KAVEAIVADLEKQTAKVGNSSDKIKQVASISANNDEVIGELIAEAFGKVGKEGVITVEEA
KGTETYVDVVEGMQFDRGFLSPYFVTNSEKMSAELDSPYILLFDKKISNMKDLLPVLEPV
AQTGKPLLIIAEDVDGEALATLVVNKLRGALKIAAVKAPGFGDRRKAMLEDIAILTGGTV
ISEERGFTLENTTLDMLGTAETVTIDKDNTTVVNGSGDSDMIKARVGQIKSQIETTTSDY
DKEKLQERLAKLAGGVAVLYVGAASEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALV
RAKKSLDKIKTENADQETGVQIVNRAIESPLRTIVSNAGGEGAVVISKVLEGKKDFGFNA
KNGEYTDMLKAGIIDPKKVTRVALENAASVSGMILTTECALTDIKEDAPAAMPPMGGGGM
PGMM
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagacattcaatttaatatagaagcacgcgacggattaaagcgtggtgtagat
aaacttgcaaacgcagtaaaagttactttaggacctaaaggtcgtaacgtgattatttca
aaatcttttggagcgccacacgtaacaaaggatggtgtaactgtagcaaaagaaatagaa
ctagaagatgctcttgaaaatatgggagcacagatggtaaaagaagttgcttcaaaaact
aatgaccttgctggtgacggtacaaccacagcaacagtacttgcacaagctatcgttaca
gaaggacttaaaaacgtagctgctggtgcaaacccaatggatcttaaaagaggtattgat
aaggcagtagaggctatcgttgcagatttagaaaaacaaactgcaaaagtgggcaactct
tcagacaagataaagcaagtagcatctatctctgcaaacaatgatgaagtgataggagag
cttatcgcagaagcttttggaaaagtaggtaaagaaggtgttatcactgtagaagaagca
aaaggaacagaaacgtatgtagatgttgtagagggtatgcagtttgatcgcggtttcctt
tctccatactttgtgacaaacagtgagaaaatgagtgcagagctagacagcccgtatatc
ttactatttgacaagaagatttcaaatatgaaagatttacttcctgtgcttgagcctgtg
gcacaaacaggaaagccacttcttatcattgcagaagatgtagatggagaagcacttgct
acacttgtggtaaataaactacgtggtgctcttaaaattgctgctgtaaaagcaccaggt
tttggagatcgtcgtaaggctatgctagaagatattgctatccttactggaggtactgta
atctcagaagagagaggctttacactagaaaacactacgctagatatgctaggtactgca
gagacagtaactatagataaagacaatacaactgttgtaaacggatctggagactcagat
atgattaaagctcgcgtagggcaaatcaaatctcaaatagagactactacatcagactat
gacaaagaaaaactacaagagcgccttgcaaaacttgcaggtggagttgcggtactttac
gtaggtgctgcctctgaggttgagatgaaagagaaaaaagaccgtgtagatgacgcttta
cacgcaactcgtgccgctgtagaagaaggtatcgttgccggtggaggtgttgctcttgta
cgtgcaaagaagtctcttgacaaaatcaaaacagaaaatgcagaccaagagactggtgtg
cagatcgtaaaccgtgcgattgagtctccacttagaacgattgtttctaatgctggtggt
gaaggagccgtggtgatttctaaagtactagaaggaaagaaagactttggttttaacgca
aaaaatggtgagtacacagatatgcttaaagctggaattatcgatcctaaaaaagtaaca
cgtgtagcactagaaaatgctgcttctgtttctggaatgattcttactacagagtgtgca
cttacagacattaaagaagatgctccagcagcaatgccacctatgggaggaggcggaatg
ccaggaatgatgtaa
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