Dokdonia sp. MED134: MED134_01360
Help
Entry
MED134_01360 CDS
T03275
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
dok
Dokdonia sp. MED134
Pathway
dok02020
Two-component system
dok02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
dok00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MED134_01360 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MED134_01360 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dok03021
]
MED134_01360 (rpoN)
Transcription machinery [BR:
dok03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MED134_01360 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
LacI
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
EAQ39225
LinkDB
All DBs
Position
1330497..1331942
Genome browser
AA seq
481 aa
AA seq
DB search
MLKQQLNFKLSQKLSPQQIQLMKLIQLPTQAFEQKIKQELEENPALDSGKEEVQDDFEEF
DNTDDFDEAPEVEINVDDYLSDDEIPEYRLSANNYSADDEDKQVPYASGTSFNQYLKTQL
NTMRISPEERSVAEFIIGSLDEAGYLRRPILDLMDDLAFTQNIYTTEETIEKMLFKVQDL
DPAGVGARNLQECLVLQLDRKTPTKSISLAIEILEKSFDHFSKKHYKKLMAKFHITEEEL
KDAIHEIEHLNPRPGGSYSSNTKIVEHVVPDFTIRIVDGELELSLNGRNAPELKISRDYS
NMLKGYKESKERTKAQKDAVLFIKQKLDAAKWFIEAIIQRQQTLFVTMSSIMNYQKKYFL
TGDERNLRPMILKDIATEIGMDVSTVSRVANSKYVDTPYGTKLIKNFFSESMTNDQGEEV
STREIKKILETVIEEEDKRKPLTDDKLAGILKEKGYPIARRTVAKYREQLELPVARLRKQ
I
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaacaacagctcaattttaaactttctcaaaagctatctccacagcaaatacag
cttatgaagcttatccagcttcctacgcaagcgtttgagcaaaagataaagcaagagcta
gaagaaaaccctgcccttgatagcggcaaagaggaggttcaagatgactttgaagagttt
gataacacagatgattttgacgaagcaccagaggtagaaattaatgtagatgattacctc
agtgatgatgagataccagagtatcgcttaagtgcaaataattacagtgcagatgacgag
gataaacaagtaccctatgcctcaggaacatcttttaaccaatacctaaaaacccaactc
aacacgatgcgtatctcaccagaggagcgtagcgttgcagagtttattataggctcacta
gatgaagctggatatttaaggcgtcccatattagatctgatggatgacctagcatttacc
caaaacatctacaccacagaagagactatagaaaaaatgctttttaaagtacaagatctt
gatcctgcgggcgtaggagcccgcaatcttcaagagtgtctagtactacaactagacaga
aaaactcctacaaagtctatctcactagccatagaaatacttgagaagtcttttgaccat
tttagcaagaagcattacaaaaagttaatggctaagttccatatcacagaagaagaactt
aaagacgccatacacgagatagaacaccttaacccaagaccaggcggatcttactcgagc
aatacaaaaatagtagagcacgtagtaccagattttaccataagaattgtagacggagaa
ttagagctatctctcaatggacgcaatgctccagagcttaaaatctctagagattatagc
aatatgctcaaagggtacaaagagtctaaagagcgcacaaaagcacaaaaagatgctgtg
ctttttataaaacaaaaacttgatgccgcaaagtggtttatagaagccattatacaacgc
cagcagaccttatttgtcacgatgagctctataatgaactaccagaaaaaatactttttg
actggtgatgagcgcaatctacgccctatgattcttaaagatatagctacagagataggt
atggatgtctctacagtatcacgtgtagcaaacagtaagtatgtagacacaccttacgga
acaaaactcattaaaaacttcttttctgaaagtatgactaatgatcaaggtgaagaagta
tctacacgtgagattaaaaaaatacttgaaacggttatcgaagaggaagataagcgcaag
ccactcacagatgacaagcttgccggcattcttaaagaaaaaggatatccaatagcccgc
agaacggttgccaaatatagagaacagctagaactaccagtagcacgacttcgaaagcaa
atttaa
DBGET
integrated database retrieval system
