KEGG   Dokdonia sp. MED134: MED134_02820
Entry
MED134_02820      CDS       T03275                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
dok  Dokdonia sp. MED134
Pathway
dok00010  Glycolysis / Gluconeogenesis
dok00020  Citrate cycle (TCA cycle)
dok00260  Glycine, serine and threonine metabolism
dok00280  Valine, leucine and isoleucine degradation
dok00310  Lysine degradation
dok00380  Tryptophan metabolism
dok00620  Pyruvate metabolism
dok00630  Glyoxylate and dicarboxylate metabolism
dok00640  Propanoate metabolism
dok00785  Lipoic acid metabolism
dok01100  Metabolic pathways
dok01110  Biosynthesis of secondary metabolites
dok01120  Microbial metabolism in diverse environments
dok01200  Carbon metabolism
dok01210  2-Oxocarboxylic acid metabolism
dok01240  Biosynthesis of cofactors
Module
dok_M00009  Citrate cycle (TCA cycle, Krebs cycle)
dok_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
dok_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
dok_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:dok00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    MED134_02820 (lpdA)
   00020 Citrate cycle (TCA cycle)
    MED134_02820 (lpdA)
   00620 Pyruvate metabolism
    MED134_02820 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    MED134_02820 (lpdA)
   00640 Propanoate metabolism
    MED134_02820 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    MED134_02820 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    MED134_02820 (lpdA)
   00310 Lysine degradation
    MED134_02820 (lpdA)
   00380 Tryptophan metabolism
    MED134_02820 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    MED134_02820 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dok04147]
    MED134_02820 (lpdA)
Enzymes [BR:dok01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     MED134_02820 (lpdA)
Exosome [BR:dok04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   MED134_02820 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 DAO FAD_oxidored HI0933_like FAD_binding_2 NAD_binding_8 FAD_binding_3 GIDA Lys_Orn_oxgnase Amino_oxidase CBM9_1 3HCDH_N 2-Hacid_dh_C AlaDh_PNT_C DUF364 UDPG_MGDP_dh_N
Other DBs
NCBI-ProteinID: EAQ38893
LinkDB
Position
1023018..1024394
AA seq 458 aa
MSKYDVIVLGSGPGGYVTAIRASQLGLKTAVVEKESLGGVCLNWGCIPTKALLKSAQVFE
YLNHAEDYGLKATGVDKDFTAVVKRSRGVAEGMSKGVQFLMKKNKIDVINGFGKIKPGKK
IDVDGKEYSADHIIIATGARSRELPNLKQDGETVIGYREAMTLKEQPKSMIVVGSGAIGI
EFASFYNSMGTEVTIVEYMPHVVPVEDEDVSKQFERSLKKAGVKVMTGSSVEKVEKTKSG
VKATVKTKKGEETLEADIVLSAVGIKTNIENIGLEDVGIVTDKDKIIVNDWYQTNMPGYY
AIGDVTPGPALAHVASAEGITCVEKIAGMHAEKIDYSNIPGCTYASPEIASVGMTEKQAK
EAGYELKVGKFPFSASGKASASGAKDGFVKVIFDAKYGEWLGCHMIGAGVTDMIAEAVLG
RKLETTGHEVLKTIHPHPTMSEAVMEAVADAYDEVIHL
NT seq 1377 nt   +upstreamnt  +downstreamnt
atgagcaaatatgatgtaatcgttttaggaagtggtccaggcggatatgtaacagcaata
cgtgcaagccagttaggcttaaaaacggcggttgttgaaaaagaaagcctaggaggcgtt
tgtttgaactggggatgtatccctacaaaagcacttcttaaaagtgctcaggtttttgaa
tacctaaatcacgcagaagattatggtcttaaagcaacaggtgttgataaagactttaca
gcagttgtaaaacgtagtcgtggtgttgcagaaggaatgagcaaaggtgttcagttctta
atgaagaaaaataagatagacgtcatcaatggttttggaaaaataaagccaggtaaaaag
atagatgtagacggtaaagaatatagcgcagaccatattattatcgcaacgggagctcgc
tcacgtgagttacctaaccttaaacaagatggtgagacggtaataggataccgcgaagca
atgacgcttaaggagcagcctaaatctatgattgttgtaggttctggagcaataggtatt
gagtttgcaagcttttataactcaatgggtacagaggttaccattgtagagtatatgcct
cacgttgtaccagtagaggatgaggatgtgtcaaaacaatttgaacgctctcttaaaaaa
gcgggtgtaaaagtaatgacaggatcatctgtagagaaggtagaaaaaactaaatctgga
gtaaaagcaactgtaaaaactaaaaaaggagaagagacactagaggcagatatcgttctt
agtgctgtaggtattaaaactaatatcgagaatataggactagaagatgtaggcatcgtt
acagataaagataagatcattgtaaacgactggtaccagactaatatgccaggttactac
gcaataggtgatgtaactcctggacctgcactcgcacacgttgcctctgcagaagggatt
acttgtgtagagaaaatcgcaggtatgcacgccgaaaaaatagactactcaaacattcca
ggatgtacttatgcatcaccagagattgcatctgtaggaatgacagaaaagcaagcaaaa
gaagctggttacgaacttaaagtgggtaaattcccattctctgcttctggtaaagcaagt
gcttctggtgcaaaagatgggtttgtaaaagtaatctttgacgcaaagtatggagagtgg
ctaggatgccatatgataggagctggtgtaacagatatgattgcagaggctgtactaggt
cgtaaactagaaactacaggtcacgaagtacttaaaaccattcacccacaccctactatg
agtgaggctgtgatggaagccgtggcagatgcttatgatgaagtaattcacctataa

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